- Class: 3
- Architecture: 3.30:2-Layer Sandwich
- Topology: 3.30.870:Endonuclease
- Homology: 3.30.870.10:Endonuclease Chain A
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1byr | [A2] | [A2] | [A2] | 2 | ||||
1bys | [A2] | [A2] | [A2] | 2 | WO4:TUNGSTATE(VI)ION | |||
1f0i | [A] | [A] | [A] | 1.4 | PO4:PHOSPHATE ION | |||
1jy1 | [A] | [A] | [A] | 1.69 | MSE:SELENOMETHIONINE | |||
1mu7 | ![]() | [A] | [A] | [A] | 2 | GOL:GLYCEROL WO4:TUNGSTATE(VI)ION | ||
1mu9 | ![]() | [A] | [A] | [A] | 2.05 | GOL:GLYCEROL VO4:VANADATE ION | ||
1nop | ![]() | [A][a](A) | [A][a](A) | [A][a](A) | 2.3 | VO4:VANADATE ION | ||
1q32 | [A] | [A] | [A] | 2.03 | ||||
1qzq | [A2] | [A2] | [A2] | 2.4 | ||||
1rff | ![]() | [A][a](A) | [A][a](A) | [A][a](A) | 1.7 | SPM:SPERMINE VO4:VANADATE ION | ||
1rfi | ![]() | [A][a](A) | [A][a](A) | [A][a](A) | 2.2 | SPM:SPERMINE VO4:VANADATE ION | ||
1rg1 | ![]() | [A](A) | [A](A) | [A](A) | 2.1 | OTS:4-(2S-AMINO-1-HYDROXYETHYL)PHENOL SPM:SPERMINE VO4:VANADATE ION | ||
1rg2 | ![]() | [A](A) | [A](A) | [A](A) | 2.1 | OTR:4-(2R-AMINO-1-HYDROXYETHYL)PHENOL OTS:4-(2S-AMINO-1-HYDROXYETHYL)PHENOL SPM:SPERMINE VO4:VANADATE ION | ||
1rgt | ![]() | [A](A) | [A](A) | [A](A) | 2 | OTR:4-(2R-AMINO-1-HYDROXYETHYL)PHENOL OTS:4-(2S-AMINO-1-HYDROXYETHYL)PHENOL SPM:SPERMINE VO4:VANADATE ION | ||
1rgu | ![]() | [A](A) | [A](A) | [A](A) | 2.22 | OTS:4-(2S-AMINO-1-HYDROXYETHYL)PHENOL SPM:SPERMINE VO4:VANADATE ION | ||
1rh0 | ![]() | [A](A) | [A](A) | [A](A) | 2.3 | OTS:4-(2S-AMINO-1-HYDROXYETHYL)PHENOL SPM:SPERMINE VO4:VANADATE ION | ||
1v0r | [A] | [A] | [A] | 1.7 | WO5:TUNGSTATE(VI) ION | |||
1v0s | [A] | [A] | [A] | 1.75 | ||||
1v0t | [A] | [A] | [A] | 1.53 | PO3:PHOSPHITE ION | |||
1v0u | [A] | [A] | [A] | 1.42 | PO3:PHOSPHITE ION | |||
1v0v | [A] | [A] | [A] | 1.7 | PO3:PHOSPHITE ION | |||
1v0w | [A] | [A] | [A] | 1.35 | PO3:PHOSPHITE ION | |||
1v0y | [A] | [A] | [A] | 1.71 | HI5:2-(BUTYRYLOXY)-1-{[(TETRAHYDROXYPHOSPHORANYL)OXY]METHYL}ETHYL BUTYRATE | |||
1xdo | [A2] | [A2] | [A2] | 3 | ||||
1xdp | [A2] | [A2] | [A2] | 2.5 | ATP:ADENOSINE-5___sq___-TRIPHOSPHATE MG:MAGNESIUM ION | |||
2c1l | [A2] | [A2] | [A2] | 1.9 | BCT:BICARBONATE ION GOL:GLYCEROL MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID SRT:S,R MESO-TARTARIC ACID TAR:D(-)-TARTARIC ACID TLA:L(+)-TARTARIC ACID TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
2f5t | [A2] | [A2] | [A2] | 1.45 | GLC:ALPHA-D-GLUCOPYRANOSE IMD:IMIDAZOLE | |||
2o8r | ![]() | [A2] | [A2] | [A2] | 2.7 | MSE:SELENOMETHIONINE SO4:SULFATE ION | ||
2ze4 | [A] | [A] | [A] | 2.5 | MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID | |||
2ze9 | ![]() | [A] | [A] | [A] | 2.3 | MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID PD7:(2R)-3-(PHOSPHONOOXY)PROPANE-1,2-DIYL DIHEPTANOATE | ||
3hsi | [A2] | [A2] | [A2] | 2.2 | MSE:SELENOMETHIONINE | |||
3qph | [A2] | [A2] | [A2] | 2.99 | ACT:ACETATE ION FRU:BETA-D-FRUCTOFURANOSE GLC:ALPHA-D-GLUCOPYRANOSE GOL:GLYCEROL | |||
3sq3 | ![]() | [A] | [A] | [A] | 2.5 | |||
3sq5 | ![]() | [A] | [A] | [A] | 2.3 | |||
3sq7 | ![]() | [A] | [A] | [A] | 2 | SO4:SULFATE ION | ||
3sq8 | ![]() | [A] | [A] | [A] | 2.1 | NEP:N1-PHOSPHONOHISTIDINE | ||
4gel | [A2] | [A2] | [A2] | 1.76 | EDO:1,2-ETHANEDIOL PO4:PHOSPHATE ION ZN:ZINC ION | |||
4gem | ![]() | [A2] | [A2] | [A2] | 2.21 | EDO:1,2-ETHANEDIOL ZN:ZINC ION | ||
4gen | [A] | [A] | [A] | 2.2 | CL:CHLORIDE ION MSE:SELENOMETHIONINE | |||
4ggj | [A2] | [A2] | [A2] | 1.75 | ZN:ZINC ION | |||
4ggk | [A2] | [A2] | [A2] | 2.1 | WO4:TUNGSTATE(VI)ION ZN:ZINC ION | |||
4h4a | [A] | [A] | [A] | 2.2 | MSE:SELENOMETHIONINE | |||
4rct | [A2] | [A2] | [A2] | 2.25 | CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE | |||
4urj | [A2] | [A2] | [A2] | 2.68 | EDO:1,2-ETHANEDIOL | |||
5box | [A4](AB) | [A4](AB) | [A4](AB) | 2.5 | GOL:GLYCEROL MPD:(4S)-2-METHYL-2,4-PENTANEDIOL | |||
5bpd | [A4](AB) | [A4](AB) | [A4](AB) | 2.4 | GOL:GLYCEROL IMD:IMIDAZOLE | |||
5bpi | [A4](AB) | [A4](AB) | [A4](AB) | 3.2 | GOL:GLYCEROL | |||
5bqt | [A4] | [A4] | [A4] | 3 | CA:CALCIUM ION | |||
5lzk | [A2] | [A2] | [A2] | 1.58 | EDO:1,2-ETHANEDIOL IOD:IODIDE ION | |||
5nw9 | [A2](A2) | [A2](A2) | [A2](A2) | 2.04 | ||||
5nwa | [A2](A2) | [A2](A2) | [A2](A2) | 3.2 | ||||
5qhi | [A2] | [A2] | [A2] | 1.73 | EDO:1,2-ETHANEDIOL GOJ:ETHYL 1~{H}-PYRAZOLE-4-CARBOXYLATE IOD:IODIDE ION | |||
5qhj | [A2] | [A2] | [A2] | 1.68 | EDO:1,2-ETHANEDIOL GOV:(2S)-1-{[(2H-1,3-BENZODIOXOL-5-YL)METHYL]AMINO}PROPAN-2-OL IOD:IODIDE ION | |||
5qhk | [A2] | [A2] | [A2] | 1.61 | EDO:1,2-ETHANEDIOL GOY:DI(PIPERIDIN-1-YL)METHANONE IOD:IODIDE ION | |||
5qhl | [A2] | [A2] | [A2] | 1.68 | EDO:1,2-ETHANEDIOL GQ7:[5-(4-AMINOPHENYL)FURAN-2-YL]METHANOL IOD:IODIDE ION | |||
5qhm | [A2] | [A2] | [A2] | 1.79 | EDO:1,2-ETHANEDIOL GQA:1-METHYL-3-OXIDANYL-PYRIDINE-2-THIONE | |||
5qhn | [A2] | [A2] | [A2] | 1.73 | EDO:1,2-ETHANEDIOL GQJ:METHYL (2~{S},4~{R})-1-(FURAN-2-YLCARBONYL)-4-OXIDANYL-PYRROLIDINE-2-CARBOXYLATE | |||
5qho | [A2] | [A2] | [A2] | 1.66 | EDO:1,2-ETHANEDIOL GOY:DI(PIPERIDIN-1-YL)METHANONE | |||
5qhp | [A2] | [A2] | [A2] | 2.06 | EDO:1,2-ETHANEDIOL GQM:5-METHOXY-2-(1~{H}-PYRAZOL-3-YL)PHENOL | |||
5qhq | [A2] | [A2] | [A2] | 1.96 | EDO:1,2-ETHANEDIOL GQP:1-[(4-FLUOROPHENYL)METHYL]BENZIMIDAZOLE | |||
5qhr | [A2] | [A2] | [A2] | 1.68 | EDO:1,2-ETHANEDIOL GQS:N-(3-FLUOROPHENYL)-5-METHYL-1,3,4-THIADIAZOL-2-AMINE | |||
5qhs | [A2] | [A2] | [A2] | 1.95 | EDO:1,2-ETHANEDIOL GQV:1-METHYL-3-OXIDANYL-PYRIDIN-2-ONE | |||
6dhu | [A] | [A] | [A] | 1.63 | EDO:1,2-ETHANEDIOL GHM:BENZENE-1,2,4-TRICARBOXYLIC ACID | |||
6die | [A] | [A] | [A] | 1.78 | EDO:1,2-ETHANEDIOL GHM:BENZENE-1,2,4-TRICARBOXYLIC ACID | |||
6dih | [A] | [A] | [A] | 1.78 | EDO:1,2-ETHANEDIOL GJS:4-HYDROXYBENZENE-1,2-DICARBOXYLIC ACID | |||
6dim | [A] | [A] | [A] | 1.81 | EDO:1,2-ETHANEDIOL GJP:4-HYDROXYQUINOLINE-3-CARBOXYLIC ACID | |||
6djd | [A] | [A] | [A] | 1.78 | EDO:1,2-ETHANEDIOL GJP:4-HYDROXYQUINOLINE-3-CARBOXYLIC ACID | |||
6dje | [A] | [A] | [A] | 1.71 | EDO:1,2-ETHANEDIOL GNY:4-HYDROXY-8-(PROPAN-2-YL)QUINOLINE-3-CARBOXYLIC ACID | |||
6djf | [A] | [A] | [A] | 1.67 | EDO:1,2-ETHANEDIOL GNV:4-HYDROXYQUINOLINE-3,8-DICARBOXYLIC ACID | |||
6djg | [A] | [A] | [A] | 1.88 | EDO:1,2-ETHANEDIOL GNJ:4-HYDROXY-8-SULFOQUINOLINE-3-CARBOXYLIC ACID | |||
6djh | [A] | [A] | [A] | 1.92 | EDO:1,2-ETHANEDIOL GNM:8-BROMO-4-OXO-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID | |||
6dji | [A] | [A] | [A] | 1.75 | EDO:1,2-ETHANEDIOL GOG:3-HYDROXYBENZENE-1,2-DICARBOXYLIC ACID | |||
6djj | [A] | [A] | [A] | 1.74 | EDO:1,2-ETHANEDIOL GM7:4-AMINOBENZENE-1,2-DICARBOXYLIC ACID |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA