- Class: 3
- Architecture: 3.30:2-Layer Sandwich
- Topology: 3.30.2090:Multidrug efflux transporter AcrB TolC docking domain
- Homology: 3.30.2090.10:Multidrug efflux transporter AcrB TolC docking domain
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1iwg | ![]() | [A3] | [A3] | [A3] | 3.5 | |||
1oy6 | ![]() | [A3] | [A3] | [A3] | 3.68 | |||
1oy8 | ![]() | [A3] | [A3] | [A3] | 3.63 | RHQ:RHODAMINE 6G | ||
1oy9 | ![]() | [A3] | [A3] | [A3] | 3.8 | ET:ETHIDIUM | ||
1oyd | ![]() | [A3] | [A3] | [A3] | 3.8 | DEQ:DEQUALINIUM | ||
1oye | ![]() | [A3] | [A3] | [A3] | 3.48 | CPF:1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID | ||
1t9t | ![]() | ![]() | [A3] | [A3] | [A3] | 3.23 | ||
1t9u | ![]() | ![]() | [A3] | [A3] | [A3] | 3.11 | CPF:1-CYCLOPROPYL-6-FLUORO-4-OXO-7-PIPERAZIN-1-YL-1,4-DIHYDROQUINOLINE-3-CARBOXYLIC ACID | |
1t9v | ![]() | ![]() | [A3] | [A3] | [A3] | 3.8 | RHQ:RHODAMINE 6G | |
1t9w | ![]() | ![]() | [A3] | [A3] | [A3] | 3.23 | NFN:6-[[(2-ETHOXY-1-NAPHTHALENYL)CARBONYL]AMINO]-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLATE | |
1t9x | ![]() | ![]() | [A3] | [A3] | [A3] | 3.08 | ET:ETHIDIUM | |
1t9y | ![]() | ![]() | [A3] | [A3] | [A3] | 3.64 | MC2:N2-(L-PHENYLALANYL)-N1-(NAPHTHALENYL)-L-ARIGNINAMIDE | |
2dhh | ![]() | [A3] | [A3] | [A3] | 2.8 | |||
2dr6 | ![]() | [A3] | [A3] | [A3] | 3.3 | DM2:DOXORUBICIN | ||
2drd | ![]() | [A3] | [A3] | [A3] | 3.1 | MIY:(4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE | ||
2gif | ![]() | [A3] | [A3] | [A3] | 2.9 | FLC:CITRATE ANION | ||
2hqc | ![]() | ![]() | [A3] | [A3] | [A3] | 3.56 | ||
2hqd | ![]() | ![]() | [A3] | [A3] | [A3] | 3.65 | ||
2hqf | ![]() | ![]() | [A3] | [A3] | [A3] | 3.38 | ||
2hqg | ![]() | ![]() | [A3] | [A3] | [A3] | 3.38 | ||
2hrt | ![]() | [A3] | [A3] | [A3] | 3 | FLC:CITRATE ANION | ||
2i6w | ![]() | [A3] | [A3] | [A3] | 3.1 | |||
2j8s | ![]() | [A3B2] | [A3B2] | [A3B2] | 2.54 | LMT:DODECYL-BETA-D-MALTOSIDE LMU:DODECYL-ALPHA-D-MALTOSIDE | ||
2rdd | ![]() | [A3B3] | [A3B3] | [A3B3] | 3.5 | AIC:(2S,5R,6R)-6-{[(2R)-2-AMINO-2-PHENYLETHANOYL]AMINO}-3,3-DIMETHYL-7-OXO-4-THIA-1-AZABICYCLO[3.2.0]HEPTANE-2-CARBOXYLIC ACID | ||
2v50 | [A3] | [A3] | [A3] | 3 | LMT:DODECYL-BETA-D-MALTOSIDE | |||
2w1b | ![]() | [A3] | [A3] | [A3] | 3.85 | DXC:(3ALPHA,5BETA,12ALPHA)-3,12-DIHYDROXYCHOLAN-24-OIC ACID | ||
3aoa | ![]() | [A3] | [A3] | [A3] | 3.35 | |||
3aob | ![]() | [A3] | [A3] | [A3] | 3.35 | RFP:RIFAMPICIN | ||
3aoc | ![]() | [A3] | [A3] | [A3] | 3.34 | ERY:ERYTHROMYCIN A | ||
3aod | ![]() | [A3] | [A3] | [A3] | 3.3 | MIY:(4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE RFP:RIFAMPICIN | ||
3d9b | ![]() | [A3] | [A3] | [A3] | 3.42 | NI:NICKEL (II) ION | ||
3noc | ![]() | [A3B2] | [A3B2] | [A3B2] | 2.7 | FME:N-FORMYLMETHIONINE | ||
3nog | ![]() | [A3B2] | [A3B2] | [A3B2] | 3.34 | FME:N-FORMYLMETHIONINE | ||
3w9h | ![]() | [A3] | [A3] | [A3] | 3.05 | P9D:[{2-[({[(3R)-1-{8-[(4-TERT-BUTYL-1,3-THIAZOL-2-YL)CARBAMOYL]-4-OXO-3-[(E)-2-(1H-TETRAZOL-5-YL)ETHENYL]-4H-PYRIDO[1,2-A]PYRIMIDIN-2-YL}PIPERIDIN-3-YL]OXY}CARBONYL)AMINO]ETHYL}(DIMETHYL)AMMONIO]ACETATE | ||
3w9i | ![]() | [A3] | [A3] | [A3] | 2.71 | LMT:DODECYL-BETA-D-MALTOSIDE | ||
3w9j | ![]() | [A3] | [A3] | [A3] | 3.15 | LMT:DODECYL-BETA-D-MALTOSIDE P9D:[{2-[({[(3R)-1-{8-[(4-TERT-BUTYL-1,3-THIAZOL-2-YL)CARBAMOYL]-4-OXO-3-[(E)-2-(1H-TETRAZOL-5-YL)ETHENYL]-4H-PYRIDO[1,2-A]PYRIMIDIN-2-YL}PIPERIDIN-3-YL]OXY}CARBONYL)AMINO]ETHYL}(DIMETHYL)AMMONIO]ACETATE | ||
4c48 | ![]() | [A3B3C3] | [A3B3C3] | [A3B3C3] | 3.3 | LMT:DODECYL-BETA-D-MALTOSIDE NI:NICKEL (II) ION | ||
4cdi | ![]() | [A3B3] | [A3B3] | [A3B3] | 3.7 | |||
4dx5 | ![]() | [A3B2] | [A3B2] | [A3B2] | 1.9 | C14:TETRADECANE D10:DECANE D12:DODECANE DD9:NONANE GOL:GLYCEROL HEX:HEXANE LMT:DODECYL-BETA-D-MALTOSIDE LMU:DODECYL-ALPHA-D-MALTOSIDE MIY:(4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE OCT:N-OCTANE SO4:SULFATE ION UND:UNDECANE | ||
4dx6 | ![]() | [A3B2] | [A3B2] | [A3B2] | 2.9 | LMT:DODECYL-BETA-D-MALTOSIDE | ||
4dx7 | ![]() | [A3B2] | [A3B2] | [A3B2] | 2.25 | D10:DECANE D12:DODECANE DM2:DOXORUBICIN GOL:GLYCEROL HEX:HEXANE LMT:DODECYL-BETA-D-MALTOSIDE LMU:DODECYL-ALPHA-D-MALTOSIDE | ||
4k7q | ![]() | [A3] | [A3] | [A3] | 3.5 | ZLD:N-{[(5S)-3-(3-FLUORO-4-MORPHOLIN-4-YLPHENYL)-2-OXO-1,3-OXAZOLIDIN-5-YL]METHYL}ACETAMIDE | ||
4mt1 | ![]() | [A3] | [A3] | [A3] | 3.54 | |||
4u8v | ![]() | ![]() | [A3B2] | [A3B2] | [A3B2] | 2.3 | LMT:DODECYL-BETA-D-MALTOSIDE MIY:(4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE | |
4u8y | ![]() | [A3B2] | [A3B2] | [A3B2] | 2.1 | LMT:DODECYL-BETA-D-MALTOSIDE MIY:(4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE | ||
4u95 | ![]() | ![]() | [A3B2] | [A3B2] | [A3B2] | 2 | LMT:DODECYL-BETA-D-MALTOSIDE MIY:(4S,4AS,5AR,12AS)-4,7-BIS(DIMETHYLAMINO)-3,10,12,12A-TETRAHYDROXY-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE | |
4u96 | ![]() | ![]() | [A3B2] | [A3B2] | [A3B2] | 2.2 | LMT:DODECYL-BETA-D-MALTOSIDE | |
4zit | ![]() | [A3] | [A3] | [A3] | 3.3 | LMT:DODECYL-BETA-D-MALTOSIDE NI:NICKEL (II) ION | ||
4ziv | ![]() | [A3] | [A3] | [A3] | 3.16 | LMT:DODECYL-BETA-D-MALTOSIDE NI:NICKEL (II) ION | ||
4ziw | ![]() | [A3] | [A3] | [A3] | 3.4 | LMT:DODECYL-BETA-D-MALTOSIDE NI:NICKEL (II) ION | ||
4zjl | ![]() | [A3] | [A3] | [A3] | 3.47 | ERY:ERYTHROMYCIN A LMT:DODECYL-BETA-D-MALTOSIDE NI:NICKEL (II) ION | ||
4zjo | ![]() | [A3] | [A3] | [A3] | 3.6 | ERY:ERYTHROMYCIN A LMT:DODECYL-BETA-D-MALTOSIDE NI:NICKEL (II) ION | ||
4zjq | ![]() | [A3] | [A3] | [A3] | 3.59 | ERY:ERYTHROMYCIN A LMT:DODECYL-BETA-D-MALTOSIDE NI:NICKEL (II) ION | ||
4zlj | ![]() | [A3] | [A3] | [A3] | 3.26 | |||
4zll | ![]() | [A3] | [A3] | [A3] | 3.36 | |||
4zln | ![]() | [A3] | [A3] | [A3] | 3.56 | |||
5jmn | [A3B2] | [A3B2] | [A3B2] | 2.5 | D10:DECANE D12:DODECANE ETE:2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL FUA:FUSIDIC ACID GOL:GLYCEROL HEX:HEXANE LMT:DODECYL-BETA-D-MALTOSIDE OCT:N-OCTANE P3G:3,6,9,12,15-PENTAOXAHEPTADECANE PTY:PHOSPHATIDYLETHANOLAMINE SO4:SULFATE ION | |||
5lq3 | ![]() | [A3] | [A3] | [A3] | 3.55 | |||
5nc5 | ![]() | [A3B3C2] | [A3B3C2] | [A3B3C2] | 3.2 | D10:DECANE D12:DODECANE DD9:NONANE HEX:HEXANE LMT:DODECYL-BETA-D-MALTOSIDE PUY:PUROMYCIN | ||
5t0o | ![]() | ![]() | [A3] | [A3] | [A3] | 3.15 | ||
5yil | ![]() | [A3] | [A3] | [A3] | 3 | |||
6baj | ![]() | [A3] | [A3] | [A3] | 3.2 | D12:DODECANE PTY:PHOSPHATIDYLETHANOLAMINE |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA