- Class: 3
- Architecture: 3.40:3-Layer(aba) Sandwich
- Topology: 3.40.1280:Alpha/beta knot
- Homology: 3.40.1280.10:
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1gz0 | [A2] | [A2] | [A2] | 2.5 | MSE:SELENOMETHIONINE | |||
1ipa | [A] | [A] | [A] | 2.4 | ||||
1j85 | [A2] | [A2] | [A2] | 2 | ||||
1k3r | [A2] | [A2] | [A2] | 2.3 | ||||
1mxi | [A2] | [A2] | [A2] | 1.7 | IOD:IODIDE ION SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
1ns5 | [A2] | [A2] | [A2] | 1.68 | MSE:SELENOMETHIONINE | |||
1nxz | [A2] | [A2] | [A2] | 2 | MSE:SELENOMETHIONINE | |||
1o6d | [A] | [A] | [A] | 1.66 | ||||
1oy5 | [A2] | [A2] | [A2] | 2.6 | ||||
1p9p | [A] | [A] | [A] | 2.5 | SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
1to0 | [A2] | [A2] | [A2] | 2.5 | MSE:SELENOMETHIONINE | |||
1uaj | [A2] | [A2] | [A2] | 1.85 | ||||
1uak | [A2] | [A2] | [A2] | 2.05 | SAM:S-ADENOSYLMETHIONINE | |||
1ual | [A2] | [A2] | [A2] | 1.8 | SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
1uam | [A2] | [A2] | [A2] | 2.2 | PO4:PHOSPHATE ION SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
1v2x | [A2] | [A2] | [A2] | 1.5 | PO4:PHOSPHATE ION SAM:S-ADENOSYLMETHIONINE | |||
1v6z | [A2] | [A2] | [A2] | 2 | MSE:SELENOMETHIONINE | |||
1vh0 | [A] | [A] | [A] | 2.31 | ||||
1vhk | [A2] | [A2] | [A2] | 2.6 | MSE:SELENOMETHIONINE | |||
1vhy | [A] | [A] | [A] | 1.9 | MSE:SELENOMETHIONINE | |||
1x7o | [A2] | [A2] | [A2] | 2.37 | MSE:SELENOMETHIONINE | |||
1x7p | [A2] | [A2] | [A2] | 2.55 | SAM:S-ADENOSYLMETHIONINE | |||
1z85 | [A2] | [A2] | [A2] | 2.12 | CL:CHLORIDE ION EDO:1,2-ETHANEDIOL MSE:SELENOMETHIONINE | |||
1zjr | [A] | [A] | [A] | 1.85 | GOL:GLYCEROL SO4:SULFATE ION | |||
2cx8 | [A2] | [A2] | [A2] | 2.53 | MSE:SELENOMETHIONINE SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
2egv | [A2] | [A2] | [A2] | 1.45 | SAM:S-ADENOSYLMETHIONINE | |||
2egw | [A2] | [A2] | [A2] | 2.8 | SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
2ha8 | [A2] | [A2] | [A2] | 1.6 | SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
2i6d | [A] | [A] | [A] | 1.85 | ACY:ACETIC ACID MSE:SELENOMETHIONINE | |||
2o3a | [A2] | [A2] | [A2] | 2.2 | ||||
2qmm | [A2] | [A2] | [A2] | 1.85 | SAM:S-ADENOSYLMETHIONINE | |||
2qwv | [A2] | [A2] | [A2] | 2.6 | ACY:ACETIC ACID MSE:SELENOMETHIONINE | |||
2v3j | [A] | [A] | [A] | 2 | MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
2v3k | [A] | [A] | [A] | 2 | MSE:SELENOMETHIONINE SAM:S-ADENOSYLMETHIONINE SO4:SULFATE ION | |||
2yy8 | [A2] | [A2] | [A2] | 2.48 | MTA:5___sq___-DEOXY-5___sq___-METHYLTHIOADENOSINE SAM:S-ADENOSYLMETHIONINE | |||
2z0y | [A] | [A] | [A] | 2.8 | MSE:SELENOMETHIONINE SAM:S-ADENOSYLMETHIONINE | |||
3ai9 | [A2] | [A2] | [A2] | 1.55 | MG:MAGNESIUM ION MSE:SELENOMETHIONINE SAM:S-ADENOSYLMETHIONINE | |||
3aia | [A2] | [A2] | [A2] | 1.4 | PBL:PENTANE-2,2,4,4-TETROL SAM:S-ADENOSYLMETHIONINE | |||
3axz | [A2] | [A2] | [A2] | 2.25 | ADN:ADENOSINE | |||
3bbd | [A2] | [A2] | [A2] | 2.15 | GOL:GLYCEROL MSE:SELENOMETHIONINE SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
3bbe | [A2] | [A2] | [A2] | 2.2 | GOL:GLYCEROL | |||
3bbh | [A2] | [A2] | [A2] | 2.25 | GOL:GLYCEROL SFG:SINEFUNGIN | |||
3dcm | [A2] | [A2] | [A2] | 2 | SAM:S-ADENOSYLMETHIONINE | |||
3e5y | [A2] | [A2] | [A2] | 2.4 | ||||
3gyq | [A2] | [A2] | [A2] | 2.45 | SAM:S-ADENOSYLMETHIONINE | |||
3ic6 | [A2] | [A2] | [A2] | 2.59 | MSE:SELENOMETHIONINE | |||
3ief | [A2] | [A2] | [A2] | 2.5 | ||||
3ilk | [A2] | [A2] | [A2] | 2.01 | ACT:ACETATE ION EDO:1,2-ETHANEDIOL MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
3knu | [A2] | [A2] | [A2] | 2.25 | ||||
3kty | [A2] | [A2] | [A2] | 2.3 | GOL:GLYCEROL MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
3kw2 | [A2] | [A2] | [A2] | 2 | ADN:ADENOSINE MSE:SELENOMETHIONINE | |||
3ky7 | [A2] | [A2] | [A2] | 2.35 | OCS:CYSTEINESULFONIC ACID | |||
3l8u | [A2] | [A2] | [A2] | 2 | ||||
3n4j | [A2] | [A2] | [A2] | 1.47 | SO4:SULFATE ION | |||
3n4k | [A2] | [A2] | [A2] | 1.76 | SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
3nk6 | [A2] | [A2] | [A2] | 2 | ||||
3nk7 | [A2] | [A2] | [A2] | 2.1 | SAM:S-ADENOSYLMETHIONINE | |||
3o7b | [A2] | [A2] | [A2] | 1.45 | SAH:S-ADENOSYL-L-HOMOCYSTEINE TYR:TYROSINE | |||
3oii | [A2] | [A2] | [A2] | 1.85 | GOL:GLYCEROL SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
3oij | [A2](a2) | [A2](a2) | [A2](a2) | 3 | MG:MAGNESIUM ION SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
3oin | [A2](a) | [A2](a) | [A2](a) | 1.9 | CL:CHLORIDE ION GOL:GLYCEROL MG:MAGNESIUM ION SAH:S-ADENOSYL-L-HOMOCYSTEINE SCY:S-ACETYL-CYSTEINE | |||
3onp | [A2] | [A2] | [A2] | 1.9 | ACY:ACETIC ACID BME:BETA-MERCAPTOETHANOL CL:CHLORIDE ION GOL:GLYCEROL MSE:SELENOMETHIONINE | |||
3quv | [A2] | [A2] | [A2] | 1.7 | EDO:1,2-ETHANEDIOL | |||
4cnd | [A2] | [A2] | [A2] | 1.5 | PEG:DI(HYDROXYETHYL)ETHER | |||
4cne | [A2] | [A2] | [A2] | 1.9 | PEG:DI(HYDROXYETHYL)ETHER SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
4cnf | [A2] | [A2] | [A2] | 1.4 | GOL:GLYCEROL MTA:5___sq___-DEOXY-5___sq___-METHYLTHIOADENOSINE PEG:DI(HYDROXYETHYL)ETHER | |||
4cng | [A2] | [A2] | [A2] | 1.1 | GOL:GLYCEROL SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
4e8b | [A2] | [A2] | [A2] | 2.25 | ||||
4fak | [A2] | [A2] | [A2] | 1.7 | PG4:TETRAETHYLENE GLYCOL PO4:PHOSPHATE ION SAM:S-ADENOSYLMETHIONINE | |||
4h3y | [A2] | [A2] | [A2] | 2.5 | CL:CHLORIDE ION SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
4h3z | [A2] | [A2] | [A2] | 2.15 | CL:CHLORIDE ION SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
4ig6 | [A2] | [A2] | [A2] | 2.4 | CL:CHLORIDE ION SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
4j3c | [A2] | [A2] | [A2] | 2 | MSE:SELENOMETHIONINE | |||
4jak | [A2] | [A2] | [A2] | 2 | ||||
4jal | [A2] | [A2] | [A2] | 2 | EDO:1,2-ETHANEDIOL EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
4kdz | [A2] | [A2] | [A2] | 2.32 | ||||
4kgn | [A2] | [A2] | [A2] | 2.15 | CL:CHLORIDE ION SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
4l69 | [A2] | [A2] | [A2] | 2.9 | ||||
4mcb | [A2] | [A2] | [A2] | 1.94 | 21W:N-(4-{[(1H-IMIDAZOL-2-YLMETHYL)AMINO]METHYL}BENZYL)-4-OXO-3,4-DIHYDROTHIENO[2,3-D]PYRIMIDINE-5-CARBOXAMIDE ACT:ACETATE ION GOL:GLYCEROL SO4:SULFATE ION | |||
4mcc | [A2] | [A2] | [A2] | 1.95 | 21X:N-[4-(AMINOMETHYL)BENZYL]-4-OXO-3,4-DIHYDROTHIENO[2,3-D]PYRIMIDINE-5-CARBOXAMIDE | |||
4mcd | [A] | [A] | [A] | 1.55 | 22L:5-PHENYLTHIENO[2,3-D]PYRIMIDIN-4(3H)-ONE | |||
4pzk | [A2] | [A2] | [A2] | 1.5 | SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
4rg1 | [A2] | [A2] | [A2] | 1.86 | 15P:POLYETHYLENE GLYCOL (N=34) PGO:S-1,2-PROPANEDIOL SAH:S-ADENOSYL-L-HOMOCYSTEINE UNX:UNKNOWN ATOM OR ION | |||
4x3l | [A2] | [A2] | [A2] | 1.7 | CL:CHLORIDE ION MTA:5___sq___-DEOXY-5___sq___-METHYLTHIOADENOSINE | |||
4x3m | [A2] | [A2] | [A2] | 1.85 | ADN:ADENOSINE K:POTASSIUM ION PO4:PHOSPHATE ION | |||
4xbo | [A2] | [A2] | [A2] | 2.6 | SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
4ypw | [A2] | [A2] | [A2] | 2.31 | 4FD:6-(BENZYLAMINO)PYRIDINE-3-CARBOXAMIDE | |||
4ypx | [A2] | [A2] | [A2] | 1.89 | 4FG:6-AMINOPYRIDINE-3-CARBOXAMIDE | |||
4ypy | [A2] | [A2] | [A2] | 1.9 | 4F9:4-(1H-IMIDAZOL-5-YL)PYRIDINE FLC:CITRATE ANION | |||
4ypz | [A2] | [A2] | [A2] | 1.84 | 4FL:4-(1H-IMIDAZOL-2-YL)PYRIDINE | |||
4yq0 | [A2] | [A2] | [A2] | 1.76 | 4FM:4-AMINO-N-(4-CHLOROBENZYL)-1,2,5-OXADIAZOLE-3-CARBOXAMIDE | |||
4yq1 | [A2] | [A2] | [A2] | 2 | 4FN:N-(1-{[(3-TERT-BUTYLBENZOYL)AMINO]METHYL}CYCLOHEXYL)-2,1-BENZOXAZOLE-4-CARBOXAMIDE | |||
4yq2 | [A2] | [A2] | [A2] | 2.65 | EFY:N-(1-{[(3-TERT-BUTYLBENZOYL)AMINO]METHYL}CYCLOPENTYL)-2,1-BENZOXAZOLE-4-CARBOXAMIDE | |||
4yq3 | [A2] | [A2] | [A2] | 2.49 | 4G1:N-(1-{[(3-METHYLBENZOYL)AMINO]METHYL}CYCLOPENTYL)-2,1-BENZOXAZOLE-4-CARBOXAMIDE | |||
4yq4 | [A2] | [A2] | [A2] | 1.89 | 4G3:6-[(3-HYDROXYBENZYL)AMINO]PYRIDINE-3-CARBOXAMIDE FLC:CITRATE ANION | |||
4yq5 | [A2] | [A2] | [A2] | 1.76 | 4G0:6-{[3-(DIMETHYLAMINO)BENZYL]AMINO}PYRIDINE-3-CARBOXAMIDE FLC:CITRATE ANION | |||
4yq6 | [A2] | [A2] | [A2] | 1.9 | 4FX:6-[(2-METHOXYBENZYL)AMINO]PYRIDINE-3-CARBOXAMIDE | |||
4yq7 | [A2] | [A2] | [A2] | 1.8 | 4G4:6-{[2-(DIMETHYLAMINO)BENZYL]AMINO}PYRIDINE-3-CARBOXAMIDE | |||
4yq8 | [A2] | [A2] | [A2] | 1.94 | 4FV:4-AMINO-N-[(1R,3S)-3-HYDROXYCYCLOPENTYL]-1,2,5-OXADIAZOLE-3-CARBOXAMIDE | |||
4yq9 | [A2] | [A2] | [A2] | 1.64 | 4GO:6-(CYCLOPENTYLAMINO)PYRIDINE-3-CARBOXAMIDE | |||
4yqa | [A2] | [A2] | [A2] | 1.55 | 4GN:6-[(CYCLOPENTYLMETHYL)AMINO]PYRIDINE-3-CARBOXAMIDE | |||
4yqb | [A2] | [A2] | [A2] | 2.1 | 4GM:6-[(2-HYDROXYBENZYL)AMINO]PYRIDINE-3-CARBOXAMIDE | |||
4yqc | [A2] | [A2] | [A2] | 1.89 | EFW:6-{[(1R,3R)-3-HYDROXYCYCLOPENTYL]AMINO}PYRIDINE-3-CARBOXAMIDE | |||
4yqd | [A2] | [A2] | [A2] | 1.45 | 4GZ:6-{[(1-{2-[(3-METHYLBENZOYL)AMINO]ETHYL}CYCLOHEXYL)METHYL]AMINO}PYRIDINE-3-CARBOXAMIDE | |||
4yqg | [A2] | [A2] | [A2] | 1.86 | 4GY:4-AMINO-N-(CYCLOHEXYLMETHYL)-1,2,5-OXADIAZOLE-3-CARBOXAMIDE | |||
4yqi | [A2] | [A2] | [A2] | 1.92 | 4GX:(4-AMINO-1,2,5-OXADIAZOL-3-YL)[4-(PYRIDIN-2-YLMETHYL)PIPERAZIN-1-YL]METHANONE | |||
4yqj | [A2] | [A2] | [A2] | 1.94 | 4GT:4-AMINO-2-(CYCLOPENTYLAMINO)PYRIMIDINE-5-CARBOXAMIDE | |||
4yqk | [A2] | [A2] | [A2] | 1.83 | 4GS:4-AMINO-N-(PIPERIDIN-4-YL)-1,2,5-OXADIAZOLE-3-CARBOXAMIDE | |||
4yql | [A2] | [A2] | [A2] | 2.4 | 4H4:4-AMINO-N-[(1S,2R)-2-(4-SULFAMOYLPHENYL)CYCLOPROPYL]-1,2,5-OXADIAZOLE-3-CARBOXAMIDE | |||
4yqn | [A2] | [A2] | [A2] | 2.2 | 4H3:6-{[(1R,3S,4R)-3-HYDROXY-4-(HYDROXYMETHYL)CYCLOPENTYL]AMINO}PYRIDINE-3-CARBOXAMIDE | |||
4yqo | [A2] | [A2] | [A2] | 1.68 | 4H1:6-({[(1R,3S)-3-(AMINOMETHYL)CYCLOHEXYL]METHYL}AMINO)PYRIDINE-3-CARBOXAMIDE | |||
4yqp | [A2] | [A2] | [A2] | 2.6 | 4H6:6-{[2-(MORPHOLIN-4-YL)BENZYL]AMINO}PYRIDINE-3-CARBOXAMIDE | |||
4yqq | [A2] | [A2] | [A2] | 1.78 | 4H7:6-{[2-(4-METHYLPIPERAZIN-1-YL)BENZYL]AMINO}PYRIDINE-3-CARBOXAMIDE | |||
4yqr | [A2] | [A2] | [A2] | 1.7 | 4HQ:(4-AMINO-1,2,5-OXADIAZOL-3-YL)(4-METHYLPIPERAZIN-1-YL)METHANONE | |||
4yqs | [A2] | [A2] | [A2] | 1.9 | 4H9:(5-AMINO-1H-1,2,4-TRIAZOL-1-YL)(4-METHOXYPHENYL)METHANONE | |||
4yqt | [A2] | [A2] | [A2] | 1.6 | 4H8:4-AMINO-2-[(2,2-DIMETHYLPROPYL)AMINO]PYRIMIDINE-5-CARBOXAMIDE | |||
4yvg | [A2] | [A2] | [A2] | 1.55 | SAM:S-ADENOSYLMETHIONINE | |||
4yvh | [A2] | [A2] | [A2] | 1.6 | SFG:SINEFUNGIN | |||
4yvi | [A2](a) | [A2](a) | [A2](a) | 3.01 | SFG:SINEFUNGIN | |||
4yvj | [A2](a) | [A2](a) | [A2](a) | 2.9 | SFG:SINEFUNGIN | |||
4yvk | [A2](a) | [A2](a) | [A2](a) | 3 | SFG:SINEFUNGIN | |||
5co4 | [A2] | [A2] | [A2] | 1.7 | GOL:GLYCEROL MTA:5___sq___-DEOXY-5___sq___-METHYLTHIOADENOSINE | |||
5d9f | [A2] | [A2] | [A2] | 1.91 | 58G:6-{[(1R,3S)-3-PHENYLCYCLOPENTYL]AMINO}PYRIDINE-3-CARBOXAMIDE | |||
5fai | [A2] | [A2] | [A2] | 1.8 | CIT:CITRIC ACID SAH:S-ADENOSYL-L-HOMOCYSTEINE UNX:UNKNOWN ATOM OR ION | |||
5gm8 | [A2] | [A2] | [A2] | 2.2 | SFG:SINEFUNGIN | |||
5gmb | [A2] | [A2] | [A2] | 1.62 | ||||
5gmc | [A2] | [A2] | [A2] | 1.7 | ||||
5gra | [A2] | [A2] | [A2] | 3.01 | ||||
5kzk | [A2] | [A2] | [A2] | 2.28 | CO:COBALT (II) ION MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
5l0z | [A2] | [A2] | [A2] | 2.9 | CO:COBALT (II) ION MSE:SELENOMETHIONINE SAM:S-ADENOSYLMETHIONINE SO4:SULFATE ION | |||
5o95 | [A2] | [A2] | [A2] | 1.49 | ||||
5o96 | [A2] | [A2] | [A2] | 2.3 | SAM:S-ADENOSYLMETHIONINE | |||
5twj | [A2] | [A2] | [A2] | 2.3 | SAM:S-ADENOSYLMETHIONINE | |||
5twk | [A2] | [A2] | [A2] | 2.1 | SFG:SINEFUNGIN | |||
5vm8 | [A] | [A] | [A] | 2.4 | SAM:S-ADENOSYLMETHIONINE | |||
5wyq | [A2] | [A2] | [A2] | 2.16 | SAM:S-ADENOSYLMETHIONINE | |||
5wyr | [A2] | [A2] | [A2] | 2.45 | SFG:SINEFUNGIN | |||
5zhi | [A2] | [A2] | [A2] | 2.2 | ||||
5zhj | [A2] | [A2] | [A2] | 1.75 | GOL:GLYCEROL SAH:S-ADENOSYL-L-HOMOCYSTEINE | |||
5zhk | [A2] | [A2] | [A2] | 2.3 | 9D6:N-[(4-{[CYCLOHEXYL(ETHYL)AMINO]METHYL}PHENYL)METHYL]-4-OXO-3,4-DIHYDROTHIENO[2,3-D]PYRIMIDINE-5-CARBOXAMIDE | |||
5zhl | [A2] | [A2] | [A2] | 2.25 | 9D0:N-({4-[(OCTYLAMINO)METHYL]PHENYL}METHYL)-4-OXO-3,4-DIHYDROTHIENO[2,3-D]PYRIMIDINE-5-CARBOXAMIDE | |||
5zhm | [A2] | [A2] | [A2] | 2.76 | 9D3:N-({4-[(DIETHYLAMINO)METHYL]PHENYL}METHYL)-4-OXO-3,4-DIHYDROTHIENO[2,3-D]PYRIMIDINE-5-CARBOXAMIDE SAM:S-ADENOSYLMETHIONINE | |||
5zhn | [A2] | [A2] | [A2] | 2.65 | 9D0:N-({4-[(OCTYLAMINO)METHYL]PHENYL}METHYL)-4-OXO-3,4-DIHYDROTHIENO[2,3-D]PYRIMIDINE-5-CARBOXAMIDE |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA