- Class: 4:Few Secondary Structures
- Architecture: 4.10:Irregular
- Topology: 4.10.530:Gamma-fibrinogen Carboxyl Terminal Fragment
- Homology: 4.10.530.10:Gamma-fibrinogen Carboxyl Terminal Fragment, domain 2
PDB Entries
| PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
|---|---|---|---|---|---|---|---|---|
| Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
| 1fib | [A] | [A] | [A] | 2.1 | CA:CALCIUM ION | |||
| 1fic | [A2] | [A2] | [A2] | 2.5 | CA:CALCIUM ION | |||
| 1fid | [A] | [A] | [A] | 2.1 | CA:CALCIUM ION | |||
| 1fza | [A2B2C2] | [A4B2] | [A4B2] | 2.9 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 1fzb | [A2B2C2][a2] | [A4B2][a2] | [A4B2][a2] | 2.9 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 1fzc | [A2B2C2][a2b2] | [A4B2][a2b2] | [A4B2][a2b2] | 2.3 | CA:CALCIUM ION MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 1fzd | [A4] | [A4] | [A4] | 2.1 | CA:CALCIUM ION MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE NDG:2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE | |||
| 1fze | [A2B2C2] | [A4B2] | [A4B2] | 3 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 1fzf | [A2B2C2][a4] | [A4B2][a4] | [A4B2][a4] | 2.7 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 1fzg | [A2B2C2][a4] | [A4B2][a4] | [A4B2][a4] | 2.5 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 1jc9 | [A] | [A] | [A] | 2.01 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 1lt9 | [ABC] | [A2B] | [A2B] | 2.8 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 1ltj | [ABC][ab] | [A2B][ab] | [A2B][ab] | 2.8 | CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 1lwu | [A2B2C2][a2] | [A4B2][a2] | [A4B2][a2] | 2.8 | BMA:BETA-D-MANNOPYRANOSE CA:CALCIUM ION GAL:BETA-D-GALACTOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE NDG:2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE NH2:AMINO GROUP | |||
| 1m1j | [A2B2C2][a2b2] | [A4B2][a2b2] | [A4B2][a2b2] | 2.7 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE NDG:2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE | |||
| 1n73 | [A2B2C2][a4] | [A4B2][a4] | [A4B2][a4] | 2.9 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 1n86 | [A2B2C2][a2b2] | [A4B2][a2b2] | [A4B2][a2b2] | 3.2 | CA:CALCIUM ION MAN:ALPHA-D-MANNOPYRANOSE NDG:2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE | |||
| 1re3 |  | [ABC][a] | [A2B][a] | [A2B][a] | 2.45 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | ||
| 1re4 | | [ABC] | [A2B] | [A2B] | 2.7 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | ||
| 1rf0 | | [ABC] | [A2B] | [A2B] | 2.81 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | ||
| 1rf1 | | [ABC][a2] | [A2B][a2] | [A2B][a2] | 2.53 | CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | ||
| 1z3s | [A] | [A] | [A] | 2.35 | CA:CALCIUM ION | |||
| 1z3u | | [A] | [A] | [A] | 2.25 | CA:CALCIUM ION | ||
| 2d39 | | [A3] | [A3] | [A3] | 1.9 | CA:CALCIUM ION | ||
| 2ffd | [ABC][a2] | [ABC][a2] | [A2B][a2] | 2.89 | CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 2fib | [A][a] | [A][a] | [A][a] | 2.01 | CA:CALCIUM ION | |||
| 2gy7 | | [AB] | [AB] | [AB] | 3.7 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE NDG:2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE SO4:SULFATE ION | ||
| 2h43 | [ABC][a] | [ABC][a] | [A2B][a] | 2.7 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE NDG:2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE NH2:AMINO GROUP | |||
| 2hlo | [ABC][a] | [ABC][a] | [A2B][a] | 2.6 | CA:CALCIUM ION HYP:4-HYDROXYPROLINE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE NDG:2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE NH2:AMINO GROUP | |||
| 2hod | [ABC][a2] | [ABC][a2] | [ABC][a2] | 2.9 | CA:CALCIUM ION HYP:4-HYDROXYPROLINE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE NH2:AMINO GROUP | |||
| 2hpc | [ABC][a2] | [ABC][a2] | [ABC][a2] | 2.9 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE NH2:AMINO GROUP | |||
| 2j0g | [A3] | [A3] | [A3] | 2.85 | BM3:2-ACETAMIDO-2-DEOXY-ALPHA-D-MANNOPYRANOSE CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 2j0h | [A3] | [A3] | [A3] | 2.85 | ACH:ACETYLCHOLINE BMA:BETA-D-MANNOPYRANOSE CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 2j0y | [A3] | [A3] | [A3] | 2.35 | ACT:ACETATE ION BGC:BETA-D-GLUCOPYRANOSE BMA:BETA-D-MANNOPYRANOSE CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 2j1g | [A3] | [A3] | [A3] | 1.95 | ACT:ACETATE ION BMA:BETA-D-MANNOPYRANOSE CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE P4C:O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL SC2:N-ACETYL-L-CYSTEINE | |||
| 2j2p | [A3] | [A3] | [A3] | 2.8 | BMA:BETA-D-MANNOPYRANOSE CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SC2:N-ACETYL-L-CYSTEINE | |||
| 2j3f | [A3] | [A3] | [A3] | 2.8 | A2G:2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOSE BMA:BETA-D-MANNOPYRANOSE CA:CALCIUM ION EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID FUC:ALPHA-L-FUCOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE P4C:O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL | |||
| 2j3g | [A3] | [A3] | [A3] | 2.5 | BMA:BETA-D-MANNOPYRANOSE CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE P4C:O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL | |||
| 2j3o | [A3] | [A3] | [A3] | 2.65 | ACT:ACETATE ION CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 2j3u | [A3] | [A3] | [A3] | 2.15 | ACT:ACETATE ION CA:CALCIUM ION EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID GLA:ALPHA-D-GALACTOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE P4C:O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL | |||
| 2j5z | [A3] | [A3] | [A3] | 1.73 | ACT:ACETATE ION CA:CALCIUM ION GAL:BETA-D-GALACTOPYRANOSE | |||
| 2j60 | [A] | [A] | [A] | 1.8 | ABE:ALPHA-D-ABEQUOPYRANOSE ACT:ACETATE ION CA:CALCIUM ION | |||
| 2j61 | [A] | [A] | [A] | 2.7 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 2j64 | [A3] | [A3] | [A3] | 2.2 | CA:CALCIUM ION | |||
| 2jhh | | [A] | [A] | [A] | 1.7 | CA:CALCIUM ION | ||
| 2jhi | | [A] | [A] | [A] | 1.8 | A2G:2-ACETAMIDO-2-DEOXY-ALPHA-D-GALACTOPYRANOSE CA:CALCIUM ION | ||
| 2jhk | | [A] | [A] | [A] | 1.75 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | ||
| 2jhl | | [A] | [A] | [A] | 1.75 | CA:CALCIUM ION SLB:N-ACETYL-BETA-NEURAMINIC ACID | ||
| 2jhm | | [A] | [A] | [A] | 1.52 | CA:CALCIUM ION EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID IPA:ISOPROPYL ALCOHOL | ||
| 2oyh | | [ABC][a2] | [ABC][a2] | [A2B][a2] | 2.4 | CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | ||
| 2oyi | | [ABC][a2] | [ABC][a2] | [A2B][a2] | 2.7 | CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | ||
| 2q9i | [ABC][ab] | [ABC][ab] | [A2B][ab] | 2.8 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 2wnp | | [A] | [A] | [A] | 1.21 | CA:CALCIUM ION IPA:ISOPROPYL ALCOHOL | ||
| 2xnx | [A4B4C4D2] | [A4B4C4D2] | [A8B4C2] | 3.3 | ||||
| 2z4e | [A2B2C2][a2b2] | [A2B2C2][a2b2] | [A4B2][a2b2] | 2.7 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | |||
| 3bvh | | [ABC][a2] | [ABC][a2] | [A2B][a2] | 2.6 | CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | ||
| 3e1i | | [ABC][a] | [ABC][a] | [A2B][a] | 2.3 | CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | ||
| 3fib | [A] | [A] | [A] | 2.1 | CA:CALCIUM ION | |||
| 3ghg | [A2B2C2][a2b2] | [A2B2C2][a2b2] | [A2B2C2][a2b2] | 2.9 | BMA:BETA-D-MANNOPYRANOSE CA:CALCIUM ION GAL:BETA-D-GALACTOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE NDG:2-ACETAMIDO-2-DEOXY-ALPHA-D-GLUCOPYRANOSE SIA:N-ACETYL-ALPHA-NEURAMINIC ACID | |||
| 3h32 | [A2B2C2][a2] | [A2B2C2][a2] | [A2B2C2][a2] | 3.6 | CA:CALCIUM ION GAL:BETA-D-GALACTOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SIA:N-ACETYL-ALPHA-NEURAMINIC ACID | |||
| 3hus | | [ABC][a2] | [ABC][a2] | [A2B][a2] | 3.04 | CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE | ||
| 4epu | [A2] | [A2] | [A2] | 2.1 | CA:CALCIUM ION | |||
| 4jyo | [A] | [A] | [A] | 2.5 | CA:CALCIUM ION | |||
| 4jzc | | [A] | [A] | [A] | 1.9 | |||
| 4m7f | [A4] | [A4] | [A4] | 2.1 | BM3:2-ACETAMIDO-2-DEOXY-ALPHA-D-MANNOPYRANOSE CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
| 4m7h | [A4] | [A4] | [A4] | 2 | ACY:ACETIC ACID CA:CALCIUM ION GOL:GLYCEROL NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
| 4nyt | [A3] | [A3] | [A3] | 2.25 | ACT:ACETATE ION CA:CALCIUM ION FUC:ALPHA-L-FUCOPYRANOSE MAN:ALPHA-D-MANNOPYRANOSE NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE PC:PHOSPHOCHOLINE PO4:PHOSPHATE ION | |||
| 4r9j | [A3] | [A3] | [A3] | 2.1 | 3LJ:2-AMINO-2-DEOXY-6-O-SULFO-ALPHA-D-GLUCOPYRANOSE ACT:ACETATE ION BMA:BETA-D-MANNOPYRANOSE CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
| 4r9t | [A3] | [A3] | [A3] | 2.25 | ACT:ACETATE ION CA:CALCIUM ION NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE SO4:SULFATE ION | |||
| 4zfg | [ABC] | [ABC] | [A2B] | 2.27 | CA:CALCIUM ION SO4:SULFATE ION | |||
| 6eub | [A] | [A] | [A] | 2.3 | 1PE:PENTAETHYLENE GLYCOL | |||
| 6qnv | [A] | [A] | [A] | 1.4 | ||||
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
