- Class: 1
- Architecture: 1.10:Orthogonal Bundle
- Topology: 1.10.3460:Chlorophyll a-b binding protein
- Homology: 1.10.3460.10:Chlorophyll a/b binding protein domain
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1rwt | ![]() | [A60] | [A60] | [A60] | 2.72 | BNG:NONYL BETA-D-GLUCOPYRANOSIDE CHL:CHLOROPHYLL B CLA:CHLOROPHYLL A DGD:DIGALACTOSYL DIACYL GLYCEROL (DGDG) LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE LUT:(3R,3___sq___R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL NA:SODIUM ION NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL XAT:(3S,5R,6S,3___sq___S,5___sq___R,6___sq___S)-5,6,5___sq___,6___sq___-DIEPOXY-5,6,5___sq___,6___sq___-TETRAHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL | ||
2bhw | ![]() | [A3] | [A3] | [A3] | 2.5 | CHL:CHLOROPHYLL B CLA:CHLOROPHYLL A DGD:DIGALACTOSYL DIACYL GLYCEROL (DGDG) LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE LUX:(3R,3___sq___R,6___sq___S,9R,9___sq___R,13R,13___sq___S)-4___sq___,5___sq___-DIDEHYDRO-5___sq___,6___sq___,7___sq___,8___sq___,9,9___sq___,10,10___sq___,11,11___sq___,12,12___sq___,13,13___sq___,14,14___sq___,15,15___sq___-OCTADECAHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL XAT:(3S,5R,6S,3___sq___S,5___sq___R,6___sq___S)-5,6,5___sq___,6___sq___-DIEPOXY-5,6,5___sq___,6___sq___-TETRAHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL | ||
2o01 | ![]() | [ABCDEFGHIJKLMNOP] | [ABCDEFGHIJKLMNOP] | [A4B2CDEFGHIJKL] | 3.4 | BCR:BETA-CAROTENE CLA:CHLOROPHYLL A PQN:PHYLLOQUINONE SF4:IRON/SULFUR CLUSTER | ||
3jcu | ![]() | [A6B2C2D2E2F2G2H2I2J2K2L2M2N2O2P2Q2R2S2T2U2V2W2] | [A6B2C2D2E2F2G2H2I2J2K2L2M2N2O2P2Q2R2S2T2U2V2W2] | [A8B2C2D2E2F2G2H2I2J2K2L2M2N2O2P2Q2R2S2T2U2V2] | 3.2 | BCR:BETA-CAROTENE BCT:BICARBONATE ION CHL:CHLOROPHYLL B CL:CHLORIDE ION CLA:CHLOROPHYLL A DGD:DIGALACTOSYL DIACYL GLYCEROL (DGDG) FE2:FE (II) ION HEM:PROTOPORPHYRIN IX CONTAINING FE LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE LUT:(3R,3___sq___R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL OEX:CA-MN4-O5 CLUSTER PHO:PHEOPHYTIN A PL9:2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE SQD:1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL XAT:(3S,5R,6S,3___sq___S,5___sq___R,6___sq___S)-5,6,5___sq___,6___sq___-DIEPOXY-5,6,5___sq___,6___sq___-TETRAHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL | ||
3pl9 | ![]() | [A] | [A] | [A] | 2.8 | CHL:CHLOROPHYLL B CLA:CHLOROPHYLL A G3P:SN-GLYCEROL-3-PHOSPHATE HTG:HEPTYL 1-THIO-BETA-D-GLUCOPYRANOSIDE LUT:(3R,3___sq___R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL XAT:(3S,5R,6S,3___sq___S,5___sq___R,6___sq___S)-5,6,5___sq___,6___sq___-DIEPOXY-5,6,5___sq___,6___sq___-TETRAHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL | ||
4lcz | ![]() | [A3] | [A3] | [A3] | 2.6 | CAC:CACODYLATE ION CHL:CHLOROPHYLL B CLA:CHLOROPHYLL A LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE LUT:(3R,3___sq___R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL NA:SODIUM ION NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL ZN:ZINC ION | ||
5xnl | ![]() | [A10B2C2D2E2F2G2H2I2J2K2L2M2N2O2P2Q2R2S2T2U2V2W2X2] | [A12B2C2D2E2F2G2H2I2J2K2L2M2N2O2P2Q2R2S2T2U2V2W2] | [A12B2C2D2E2F2G2H2I2J2K2L2M2N2O2P2Q2R2S2T2U2V2W2] | 2.7 | BCR:BETA-CAROTENE BCT:BICARBONATE ION CHL:CHLOROPHYLL B CL:CHLORIDE ION CLA:CHLOROPHYLL A DGD:DIGALACTOSYL DIACYL GLYCEROL (DGDG) FE2:FE (II) ION HEM:PROTOPORPHYRIN IX CONTAINING FE LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE LUT:(3R,3___sq___R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL OEX:CA-MN4-O5 CLUSTER PHO:PHEOPHYTIN A PL9:2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE SQD:1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL XAT:(3S,5R,6S,3___sq___S,5___sq___R,6___sq___S)-5,6,5___sq___,6___sq___-DIEPOXY-5,6,5___sq___,6___sq___-TETRAHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL | ||
5xnm | [A10B2C2D2E2F2G2H2I2J2K2L2M2N2O2P2Q2R2S2T2U2V2W2] | [A10B2C2D2E2F2G2H2I2J2K2L2M2N2O2P2Q2R2S2T2U2V2W2] | [A10B4C2D2E2F2G2H2I2J2K2L2M2N2O2P2Q2R2S2T2U2V2] | 3.2 | BCR:BETA-CAROTENE BCT:BICARBONATE ION CHL:CHLOROPHYLL B CLA:CHLOROPHYLL A DGD:DIGALACTOSYL DIACYL GLYCEROL (DGDG) FE2:FE (II) ION HEM:PROTOPORPHYRIN IX CONTAINING FE LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE LUT:(3R,3___sq___R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL OEX:CA-MN4-O5 CLUSTER PHO:PHEOPHYTIN A PL9:2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE SQD:1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL XAT:(3S,5R,6S,3___sq___S,5___sq___R,6___sq___S)-5,6,5___sq___,6___sq___-DIEPOXY-5,6,5___sq___,6___sq___-TETRAHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL | |||
5xnn | [A2BC] | [A2BC] | [A2BC] | 3.6 | BCR:BETA-CAROTENE CHL:CHLOROPHYLL B CLA:CHLOROPHYLL A LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE LUT:(3R,3___sq___R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL XAT:(3S,5R,6S,3___sq___S,5___sq___R,6___sq___S)-5,6,5___sq___,6___sq___-DIEPOXY-5,6,5___sq___,6___sq___-TETRAHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL | |||
5xno | ![]() | [A2BC] | [A2BC] | [A2BC] | 3.5 | BCR:BETA-CAROTENE CHL:CHLOROPHYLL B CLA:CHLOROPHYLL A LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE LUT:(3R,3___sq___R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL NEX:(1R,3R)-6-{(3E,5E,7E,9E,11E,13E,15E,17E)-18-[(1S,4R,6R)-4-HYDROXY-2,2,6-TRIMETHYL-7-OXABICYCLO[4.1.0]HEPT-1-YL]-3,7,12,16-TETRAMETHYLOCTADECA-1,3,5,7,9,11,13,15,17-NONAENYLIDENE}-1,5,5-TRIMETHYLCYCLOHEXANE-1,3-DIOL XAT:(3S,5R,6S,3___sq___S,5___sq___R,6___sq___S)-5,6,5___sq___,6___sq___-DIEPOXY-5,6,5___sq___,6___sq___-TETRAHYDRO-BETA,BETA-CAROTENE-3,3___sq___-DIOL |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA