- Class: 1
- Architecture: 1.20:Up-down Bundle
- Topology: 1.20.840:Methyl-coenzyme M Reductase
- Homology: 1.20.840.10:Methyl-coenzyme M reductase, alpha/beta subunit, C-terminal
PDB Entries
| PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
|---|---|---|---|---|---|---|---|---|
| Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
| 1e6v | [A2B2C2] | [A4B2] | [A4B2] | 2.7 | COM:1-THIOETHANESULFONIC ACID F43:FACTOR 430 TP7:COENZYME B | |||
| 1e6y | [A2B2C2] | [A4B2] | [A4B2] | 1.6 | AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID F43:FACTOR 430 GL3:THIOGLYCIN GOL:GLYCEROL MHS:N1-METHYLATED HISTIDINE OCS:CYSTEINESULFONIC ACID SMC:S-METHYLCYSTEINE TP7:COENZYME B | |||
| 1hbm | [A2B2C2] | [A4B2] | [A4B2] | 1.8 | AGM:5-METHYL-ARGININE CL:CHLORIDE ION F43:FACTOR 430 GL3:THIOGLYCIN GOL:GLYCEROL MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE NA:SODIUM ION SHT:O-PHOSPHONO-N-{(2E)-7-[(2-SULFOETHYL)DITHIO]HEPT-2-ENOYL}-L-THREONINE SMC:S-METHYLCYSTEINE ZN:ZINC ION | |||
| 1hbn | [A2B2C2] | [A4B2] | [A4B2] | 1.16 | AGM:5-METHYL-ARGININE CL:CHLORIDE ION COM:1-THIOETHANESULFONIC ACID F43:FACTOR 430 GL3:THIOGLYCIN GOL:GLYCEROL MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE NA:SODIUM ION SMC:S-METHYLCYSTEINE TP7:COENZYME B ZN:ZINC ION | |||
| 1hbo | [A2B2C2] | [A4B2] | [A4B2] | 1.78 | AGM:5-METHYL-ARGININE CL:CHLORIDE ION COM:1-THIOETHANESULFONIC ACID F43:FACTOR 430 GL3:THIOGLYCIN GOL:GLYCEROL MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE NA:SODIUM ION SMC:S-METHYLCYSTEINE TP7:COENZYME B ZN:ZINC ION | |||
| 1hbu | [A2B2C2] | [A4B2] | [A4B2] | 1.9 | AGM:5-METHYL-ARGININE CL:CHLORIDE ION COM:1-THIOETHANESULFONIC ACID F43:FACTOR 430 GL3:THIOGLYCIN GOL:GLYCEROL MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE NA:SODIUM ION SMC:S-METHYLCYSTEINE TP7:COENZYME B ZN:ZINC ION | |||
| 1mro | [A2B2C2] | [A4B2] | [A4B2] | 1.16 | AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID F43:FACTOR 430 GL3:THIOGLYCIN GOL:GLYCEROL MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE NA:SODIUM ION SMC:S-METHYLCYSTEINE TP7:COENZYME B ZN:ZINC ION | |||
| 3m1v | [A2B2C2] | [A4B2] | [A4B2] | 1.45 | ACT:ACETATE ION AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID EDO:1,2-ETHANEDIOL F43:FACTOR 430 GL3:THIOGLYCIN MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE PEG:DI(HYDROXYETHYL)ETHER SMC:S-METHYLCYSTEINE TP7:COENZYME B ZN:ZINC ION | |||
| 3m2r | [A2B2C2] | [A4B2] | [A4B2] | 1.3 | AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID EDO:1,2-ETHANEDIOL F43:FACTOR 430 GL3:THIOGLYCIN MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE PEG:DI(HYDROXYETHYL)ETHER SMC:S-METHYLCYSTEINE TP7:COENZYME B TPZ:O-PHOSPHONO-N-(5-SULFANYLPENTANOYL)-L-THREONINE ZN:ZINC ION | |||
| 3m2u | [A2B2C2] | [A4B2] | [A4B2] | 1.4 | ACT:ACETATE ION AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID EDO:1,2-ETHANEDIOL F43:FACTOR 430 GL3:THIOGLYCIN MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE PEG:DI(HYDROXYETHYL)ETHER SMC:S-METHYLCYSTEINE TP7:COENZYME B TXZ:O-PHOSPHONO-N-(6-SULFANYLHEXANOYL)-L-THREONINE ZN:ZINC ION | |||
| 3m2v | [A2B2C2] | [A4B2] | [A4B2] | 1.8 | ACT:ACETATE ION AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID EDO:1,2-ETHANEDIOL F43:FACTOR 430 GL3:THIOGLYCIN MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE SMC:S-METHYLCYSTEINE TP7:COENZYME B XP8:O-PHOSPHONO-N-(8-SULFANYLOCTANOYL)-L-THREONINE ZN:ZINC ION | |||
| 3m30 | [A2B2C2] | [A4B2] | [A4B2] | 1.45 | ACT:ACETATE ION AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID EDO:1,2-ETHANEDIOL F43:FACTOR 430 GL3:THIOGLYCIN MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE PEG:DI(HYDROXYETHYL)ETHER SMC:S-METHYLCYSTEINE TP7:COENZYME B XP9:O-PHOSPHONO-N-(9-SULFANYLNONANOYL)-L-THREONINE ZN:ZINC ION | |||
| 3m32 | [A2B2C2] | [A4B2] | [A4B2] | 1.35 | ACT:ACETATE ION AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID EDO:1,2-ETHANEDIOL F43:FACTOR 430 GL3:THIOGLYCIN MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE PEG:DI(HYDROXYETHYL)ETHER SHT:O-PHOSPHONO-N-{(2E)-7-[(2-SULFOETHYL)DITHIO]HEPT-2-ENOYL}-L-THREONINE SMC:S-METHYLCYSTEINE TP7:COENZYME B ZN:ZINC ION | |||
| 3pot | [A2B2C2] | [A4B2] | [A4B2] | 1.2 | 06C:IODOMETHANE AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID EDO:1,2-ETHANEDIOL F43:FACTOR 430 GL3:THIOGLYCIN K:POTASSIUM ION MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE SMC:S-METHYLCYSTEINE TP7:COENZYME B TXZ:O-PHOSPHONO-N-(6-SULFANYLHEXANOYL)-L-THREONINE | |||
| 3sqg | [A2B2C2] | [A4B2] | [A4B2] | 2.1 | 0AF:7-HYDROXY-L-TRYPTOPHAN 1PE:PENTAETHYLENE GLYCOL CA:CALCIUM ION CL:CHLORIDE ION COM:1-THIOETHANESULFONIC ACID GL3:THIOGLYCIN GOL:GLYCEROL M43:(17[2]S)-17[2]-METHYLTHIO-COENZYME F43 MHO:S-OXYMETHIONINE MHS:N1-METHYLATED HISTIDINE P6G:HEXAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL SO4:SULFATE ION TP7:COENZYME B | |||
| 5a0y | [A2B2C2] | [A4B2] | [A4B2] | 1.1 | AGM:5-METHYL-ARGININE CL:CHLORIDE ION COM:1-THIOETHANESULFONIC ACID DYA:DIDEHYDROASPARTATE F43:FACTOR 430 GL3:THIOGLYCIN K:POTASSIUM ION MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE NA:SODIUM ION SMC:S-METHYLCYSTEINE TP7:COENZYME B | |||
| 5a8k | [A2B2C2] | [A4B2] | [A4B2] | 1.41 | AGM:5-METHYL-ARGININE CA:CALCIUM ION COM:1-THIOETHANESULFONIC ACID ETX:2-ETHOXYETHANOL F43:FACTOR 430 GL3:THIOGLYCIN K:POTASSIUM ION MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE SMC:S-METHYLCYSTEINE TP7:COENZYME B | |||
| 5a8r | [A2B2C2] | [A2B2C2] | [A2B2C2] | 2.15 | AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID DYA:DIDEHYDROASPARTATE F43:FACTOR 430 GL3:THIOGLYCIN K:POTASSIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE SMC:S-METHYLCYSTEINE TP7:COENZYME B | |||
| 5a8w | [A2B2C2] | [A2B2C2] | [A2B2C2] | 1.8 | ACT:ACETATE ION AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID F43:FACTOR 430 GL3:THIOGLYCIN MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE NA:SODIUM ION SMC:S-METHYLCYSTEINE TP7:COENZYME B | |||
| 5g0r | [A2B2C2] | [A4B2] | [A4B2] | 1.25 | AGM:5-METHYL-ARGININE CL:CHLORIDE ION DYA:DIDEHYDROASPARTATE F43:FACTOR 430 GL3:THIOGLYCIN K:POTASSIUM ION MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE NA:SODIUM ION SMC:S-METHYLCYSTEINE TP7:COENZYME B | |||
| 5n1q | [A2B2C2] | [A2B2C2] | [A2B2C2] | 1.9 | AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID F43:FACTOR 430 GL3:THIOGLYCIN GOL:GLYCEROL K:POTASSIUM ION MG:MAGNESIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE TP7:COENZYME B | |||
| 5n28 | [A2B2C2] | [A2B2C2] | [A2B2C2] | 2.8 | AGM:5-METHYL-ARGININE COM:1-THIOETHANESULFONIC ACID F43:FACTOR 430 GL3:THIOGLYCIN K:POTASSIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE TP7:COENZYME B TRX:6-HYDROXYTRYPTOPHAN | |||
| 5n2a | [A2B2C2] | [A2B2C2] | [A2B2C2] | 2.8 | AGM:5-METHYL-ARGININE BR:BROMIDE ION COM:1-THIOETHANESULFONIC ACID F43:FACTOR 430 GL3:THIOGLYCIN K:POTASSIUM ION MGN:2-METHYL-GLUTAMINE MHS:N1-METHYLATED HISTIDINE TP7:COENZYME B TRX:6-HYDROXYTRYPTOPHAN | |||
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
