[AB]
- Classes: Alpha and beta proteins (a+b)
- Folds: DNA clamp
- Superfamilies: DNA clamp
- Families: DNA polymerase III, beta subunit
- Protein Domains: DNA polymerase III, beta subunit
- Species: Escherichia coli [TaxId: 562]
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | ||
---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | |||||
1jqj | [AB] | [AB] | [AB] | 2.9 | |||
1jql | [AB] | [AB] | [AB] | 2.5 | |||
1mmi | [A2] | [A2] | [A2] | 1.85 | |||
1ok7 | [A2][a] | [A2][a] | [A2][a] | 1.65 | |||
1unn | [A2B2] | [A2B2] | [A2B2] | 1.9 | SO4:SULFATE ION | ||
2pol | [A2] | [A2] | [A2] | 2.5 | |||
3bep | [A2](AB) | [A2](AB) | [A2](AB) | 1.92 | 5CY:1-(3-HYDROXYPROPYL)-2-{(1E,3E,5E)-5-[1-(3-HYDROXYPROPYL)-3,3-DIMETHYL-1,3-DIHYDRO-2H-INDOL-2-YLIDENE]PENTA-1,3-DIEN-1-YL}-3,3-DIMETHYL-3H-INDOLIUM | ||
3d1e | [A2][a] | [A2][a] | [A2][a] | 1.9 | |||
3d1f | [A2][a2] | [A2][a2] | [A2][a2] | 2 | 323:2-[3,6-BIS(DIMETHYLAMINO)XANTHEN-9-YL]-5-METHANOYL-BENZOATE PEG:DI(HYDROXYETHYL)ETHER | ||
3d1g | [A2] | [A2] | [A2] | 1.64 | 322:[(5R)-5-(2,3-DIBROMO-5-ETHOXY-4-HYDROXYBENZYL)-4-OXO-2-THIOXO-1,3-THIAZOLIDIN-3-YL]ACETIC ACID | ||
3qsb | [AB] | [A2] | [A2] | 1.9 | 743:(1R,5R)-5-{(1Z)-N-[(4___sq___-FLUOROBIPHENYL-4-YL)METHOXY]BUTANIMIDOYL}-2,2-DIMETHYL-4,6-DIOXOCYCLOHEXANECARBONITRILE CSO:S-HYDROXYCYSTEINE | ||
4k3k | [A2] | [A2] | [A2] | 1.85 | CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL SFK:N-(4-METHYLPENTANOYL)-L-PHENYLALANINE | ||
4k3l | [A2] | [A2] | [A2] | 1.5 | ACE:ACETYL GROUP CA:CALCIUM ION CL:CHLORIDE ION EDO:1,2-ETHANEDIOL LEU:LEUCINE PEG:DI(HYDROXYETHYL)ETHER PGE:TRIETHYLENE GLYCOL PHE:PHENYLALANINE | ||
4k3s | [A2] | [A2] | [A2] | 1.75 | CA:CALCIUM ION P4C:O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL PG4:TETRAETHYLENE GLYCOL | ||
4mjp | [A2] | [A2] | [A2] | 1.85 | 27O:(2R)-2-(4-CYCLOHEXYLNAPHTHALEN-1-YL)PROPANOIC ACID CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER PGE:TRIETHYLENE GLYCOL | ||
4mjq | [A2] | [A2] | [A2] | 1.73 | 27R:[2-AMINO-3-(4-BROMOBENZOYL)PHENYL]ACETIC ACID CA:CALCIUM ION CL:CHLORIDE ION EDO:1,2-ETHANEDIOL PG4:TETRAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL | ||
4mjr | [A2] | [A2] | [A2] | 1.62 | 0LA:(2S)-2-(6-CHLORO-9H-CARBAZOL-2-YL)PROPANOIC ACID CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER PGE:TRIETHYLENE GLYCOL | ||
4n94 | [A2] | [A2] | [A2] | 1.73 | 2HO:3,4-DIFLUOROBENZAMIDE CA:CALCIUM ION CL:CHLORIDE ION EDO:1,2-ETHANEDIOL PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL | ||
4n95 | [A2] | [A2] | [A2] | 1.8 | 2HQ:5-CHLORO-1H-INDOLE-2,3-DIONE CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL | ||
4n96 | [A2] | [A2] | [A2] | 1.7 | 6NI:6-NITROINDAZOLE CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER | ||
4n97 | [A2] | [A2] | [A2] | 1.97 | 2HU:5-NITRO-1H-INDOLE CA:CALCIUM ION PEG:DI(HYDROXYETHYL)ETHER | ||
4n98 | [A2] | [A2] | [A2] | 1.7 | 4FC:4___sq___-FLUORO-1,1___sq___-BIPHENYL-4-CARBOXYLIC ACID CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER | ||
4n99 | [A2] | [A2] | [A2] | 2.3 | 2J1:6-CHLORO-2,3,4,9-TETRAHYDRO-1H-CARBAZOLE-7-CARBOXYLICACID CA:CALCIUM ION PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL | ||
4n9a | [A2] | [A2] | [A2] | 1.9 | 2J2:(1R)-6-CHLORO-2,3,4,9-TETRAHYDRO-1H-CARBAZOLE-1-CARBOXYLIC ACID CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL | ||
4ovf | [A2] | [A2] | [A2] | 2.05 | 2VG:(2R)-6-CHLORO-2,3,4,9-TETRAHYDRO-1H-CARBAZOLE-2-CARBOXYLIC ACID CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL | ||
4ovg | [A2] | [A2] | [A2] | 1.9 | 2VF:(2R)-9-(2-AMINO-2-OXOETHYL)-6-CHLORO-2,3,4,9-TETRAHYDRO-1H-CARBAZOLE-2-CARBOXYLIC ACID CA:CALCIUM ION CL:CHLORIDE ION EDO:1,2-ETHANEDIOL PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL | ||
4ovh | [A2] | [A2] | [A2] | 2.25 | 2VE:(2R)-6-BROMO-9-{2-[(CARBOXYMETHYL)AMINO]-2-OXOETHYL}-2,3,4,9-TETRAHYDRO-1H-CARBAZOLE-2-CARBOXYLIC ACID CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL | ||
4pnu | [A2] | [A2] | [A2] | 1.9 | 2VD:(2R)-6-BROMO-9-(2-{[(1R)-1-CARBOXY-2-PHENYLETHYL]AMINO}-2-OXOETHYL)-2,3,4,9-TETRAHYDRO-1H-CARBAZOLE-2-CARBOXYLIC ACID CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER | ||
4pnv | [A2] | [A2] | [A2] | 1.86 | CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER | ||
4pnw | [A2] | [A2] | [A2] | 2 | 2VM:(2R)-6-BROMO-9-(2-{[(1S)-1-CARBOXY-2-PHENYLETHYL]AMINO}-2-OXOETHYL)-2,3,4,9-TETRAHYDRO-1H-CARBAZOLE-2-CARBOXYLIC ACID CA:CALCIUM ION CL:CHLORIDE ION PEG:DI(HYDROXYETHYL)ETHER |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA