[AB]
- Classes: Multi-domain proteins (alpha and beta)
- Folds: HydB/Nqo4-like
- Superfamilies: HydB/Nqo4-like
- Families: Nickel-iron hydrogenase, large subunit
- Protein Domains: automated matches
- Species: Desulfovibrio fructosovorans [TaxId: 878]
PDB Entries
| PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | ||
|---|---|---|---|---|---|---|---|
| Amino Acid sequence | SCOPe Family Level | CATH Homology Level | |||||
| 1yqw |  |
[AB] | [AB] | [AB] | 1.83 | BCT:BICARBONATE ION F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON FE2:FE (II) ION GOL:GLYCEROL MG:MAGNESIUM ION NI:NICKEL (II) ION PER:PEROXIDE ION SF4:IRON/SULFUR CLUSTER | |
| 1yrq | [AB] | [AB] | [AB] | 2.1 | F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON MG:MAGNESIUM ION NI:NICKEL (II) ION SF4:IRON/SULFUR CLUSTER | ||
| 3cur | |
[AB] | [AB] | [AB] | 2.4 | F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON GOL:GLYCEROL MG:MAGNESIUM ION NI:NICKEL (II) ION PER:PEROXIDE ION SF4:IRON/SULFUR CLUSTER | |
| 3cus | |
[AB] | [AB] | [AB] | 2.2 | CSO:S-HYDROXYCYSTEINE F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON GOL:GLYCEROL MG:MAGNESIUM ION NI:NICKEL (II) ION SF4:IRON/SULFUR CLUSTER | |
| 3h3x | |
[AB] | [AB] | [AB] | 2.7 | F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON GOL:GLYCEROL MG:MAGNESIUM ION NI:NICKEL (II) ION SF4:IRON/SULFUR CLUSTER | |
| 4ue2 | [AB] | [AB] | [AB] | 2.02 | CSO:S-HYDROXYCYSTEINE F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON GOL:GLYCEROL MG:MAGNESIUM ION NI:NICKEL (II) ION SF4:IRON/SULFUR CLUSTER | ||
| 4ue6 | [AB] | [AB] | [AB] | 2.3 | CSO:S-HYDROXYCYSTEINE F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON GOL:GLYCEROL MG:MAGNESIUM ION NI:NICKEL (II) ION SF4:IRON/SULFUR CLUSTER | ||
| 4upe | |
[AB] | [AB] | [AB] | 1.8 | CA:CALCIUM ION CSX:S-OXY CYSTEINE F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON GOL:GLYCEROL MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID NI:NICKEL (II) ION PO4:PHOSPHATE ION SF4:IRON/SULFUR CLUSTER | |
| 4upv | |
[AB] | [AB] | [AB] | 1.52 | CL:CHLORIDE ION CSS:S-MERCAPTOCYSTEINE CSX:S-OXY CYSTEINE F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON GLY:GLYCINE GOL:GLYCEROL H2S:HYDROSULFURIC ACID MG:MAGNESIUM ION NI:NICKEL (II) ION SF4:IRON/SULFUR CLUSTER SOT:MORPHOLINE-4-SULFONIC ACID | |
| 4uql | |
[AB] | [AB] | [AB] | 1.22 | CL:CHLORIDE ION CSS:S-MERCAPTOCYSTEINE CSX:S-OXY CYSTEINE F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON GLY:GLYCINE GOL:GLYCEROL H2S:HYDROSULFURIC ACID MG:MAGNESIUM ION NI:NICKEL (II) ION SF4:IRON/SULFUR CLUSTER SOT:MORPHOLINE-4-SULFONIC ACID | |
| 4uqp | |
[AB] | [AB] | [AB] | 1.42 | CSS:S-MERCAPTOCYSTEINE CSX:S-OXY CYSTEINE F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON GLY:GLYCINE GOL:GLYCEROL H2S:HYDROSULFURIC ACID MG:MAGNESIUM ION NI:NICKEL (II) ION SF4:IRON/SULFUR CLUSTER SOT:MORPHOLINE-4-SULFONIC ACID | |
| 4urh | [AB] | [AB] | [AB] | 1.44 | CSX:S-OXY CYSTEINE F3S:FE3-S4 CLUSTER FCO:CARBONMONOXIDE-(DICYANO) IRON GOL:GLYCEROL MG:MAGNESIUM ION NI:NICKEL (II) ION SF4:IRON/SULFUR CLUSTER | ||
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
