Number of Protein Chains:7
- Classes: All beta proteins
- Folds: TNF-like
- Superfamilies: TNF-like
- Families: TNF-like
- Protein Domains: Tumor necrosis factor (TNF)
- Species: Human (Homo sapiens) [TaxId: 9606]
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | ||
---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | |||||
1a8m | [A3] | [A3] | [A3] | 2.3 | |||
1tnf | [A3] | [A3] | [A3] | 2.6 | |||
1tnr | [A3B3] | [A3B3] | [A3B3] | 2.85 | |||
2az5 | [A4] | [A4] | [A4] | 2.1 | 307:6,7-DIMETHYL-3-[(METHYL{2-[METHYL({1-[3-(TRIFLUOROMETHYL)PHENYL]-1H-INDOL-3-YL}METHYL)AMINO]ETHYL}AMINO)METHYL]-4H-CHROMEN-4-ONE | ||
2tun | [A6] | [A6] | [A6] | 3.1 | |||
2zjc | [A3] | [A3] | [A3] | 2.5 | GOL:GLYCEROL | ||
2zpx | [A3] | [A3] | [A3] | 2.83 | |||
3alq | [A3B3] | [A3B3] | [A3B3] | 3 | CO:COBALT (II) ION | ||
3l9j | [AB] | [AB] | [AB] | 2.1 | MG:MAGNESIUM ION | ||
3wd5 | [ABC] | [ABC] | [A2B] | 3.1 | |||
4g3y | [A3B3C3] | [A3B3C3] | [A6B3] | 2.6 | |||
4tsv | [A3] | [A3] | [A3] | 1.8 | |||
5m2i | [A3B3] | [A3B3] | [A3B3] | 2.15 | |||
5m2j | [A3] | [A3] | [A3] | 1.9 | |||
5m2m | [A3B3] | [A3B3] | [A3B3] | 2.3 | |||
5mu8 | [A2] | [A2] | [A2] | 3 | JNI:~{N}4-(PHENYLMETHYL)-~{N}4-[2-[3-(2-PIPERAZIN-1-YLPYRIMIDIN-5-YL)PHENYL]PHENYL]PYRIMIDINE-2,4-DIAMINE | ||
5tsw | [A3] | [A3] | [A3] | 2.5 | |||
5uui | [A3] | [A3] | [A3] | 1.4 | MTN:S-[(1-OXYL-2,2,5,5-TETRAMETHYL-2,5-DIHYDRO-1H-PYRROL-3-YL)METHYL] METHANESULFONOTHIOATE | ||
5yoy | [A3B3C3] | [A3B3C3] | [A3B3C3] | 2.73 | |||
6ooy | [A3] | [A3] | [A3] | 2.5 | A7M:{1-[(2,5-DIMETHYLPHENYL)METHYL]-1H-BENZIMIDAZOL-2-YL}METHANOL MRD:(4R)-2-METHYLPENTANE-2,4-DIOL | ||
6ooz | [A3] | [A3] | [A3] | 2.8 | A6Y:(S)-{1-[(2,5-DIMETHYLPHENYL)METHYL]-1H-BENZIMIDAZOL-2-YL}(PYRIDIN-4-YL)METHANOL CL:CHLORIDE ION | ||
6op0 | [A3] | [A3] | [A3] | 2.55 | A7A:(R)-{1-[(2,5-DIMETHYLPHENYL)METHYL]-6-(1-METHYL-1H-PYRAZOL-4-YL)-1H-BENZIMIDAZOL-2-YL}(PYRIDIN-4-YL)METHANOL | ||
6rmj | [A3] | [A3] | [A3] | 2.65 | |||
6x81 | [A3] | [A3] | [A3] | 2.81 | UTJ:[4-(ISOQUINOLIN-8-YL)PHENYL]ACETONITRILE | ||
6x82 | [A3] | [A3] | [A3] | 2.75 | UTM:8-[4-(2-{5-[(4-METHYLPIPERAZIN-1-YL)METHYL]-2-(1H-PYRROLO[3,2-C]PYRIDIN-3-YL)PHENOXY}ETHYL)PHENYL]ISOQUINOLINE | ||
6x83 | [A3] | [A3] | [A3] | 2.83 | UTS:1-BENZYL-1H-BENZIMIDAZOLE | ||
6x85 | [A3] | [A3] | [A3] | 2.85 | UTV:1-{[2-(DIFLUOROMETHOXY)PHENYL]METHYL}-2,2-DIMETHYL-1,2-DIHYDRO-3H-INDOL-3-ONE | ||
6x86 | [A3] | [A3] | [A3] | 2.93 | UTY:3-[(6-{2-[(3R)-4-(HYDROXYACETYL)-3-METHYLPIPERAZIN-1-YL]PYRIMIDIN-5-YL}-2,2-DIMETHYL-3-OXO-2,3-DIHYDRO-1H-INDOL-1-YL)METHYL]PYRIDINE-2-CARBONITRILE | ||
7jra | [A3] | [A3] | [A3] | 2.1 | GOL:GLYCEROL VGY:2-[5-(3-CHLORO-4-{[(1R)-1-(2-FLUOROPHENYL)ETHYL]AMINO}QUINOLIN-6-YL)PYRIMIDIN-2-YL]PROPAN-2-OL | ||
7kp9 | [A3] | [A3] | [A3] | 2.15 | A7G:1-{[2-(DIFLUOROMETHOXY)PHENYL]METHYL}-2-METHYL-6-[6-(PIPERAZIN-1-YL)PYRIDIN-3-YL]-1H-BENZIMIDAZOLE | ||
7kpa | [A3] | [A3] | [A3] | 2.3 | D84:5-(1-{[2-(DIFLUOROMETHOXY)PHENYL]METHYL}-2-{[3-(2-OXOPYRROLIDIN-1-YL)PHENOXY]METHYL}-1H-BENZIMIDAZOL-6-YL)PYRIDIN-2(1H)-ONE | ||
7kpb | [A3B2CD] | [A3B2CD] | [A3B2CD] | 3 | D84:5-(1-{[2-(DIFLUOROMETHOXY)PHENYL]METHYL}-2-{[3-(2-OXOPYRROLIDIN-1-YL)PHENOXY]METHYL}-1H-BENZIMIDAZOL-6-YL)PYRIDIN-2(1H)-ONE GOL:GLYCEROL NAG:2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA