[A5BCDEF]
- Classes: All beta proteins
- Folds: Immunoglobulin-like beta-sandwich
- Superfamilies: Immunoglobulin
- Families: V set domains (antibody variable domain-like)
- Protein Domains: automated matches
- Species: Llama (Lama glama) [TaxId: 9844]
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | ||
---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | |||||
4lde | [AB] | [AB] | [AB] | 2.79 | 1WV:(2S)-2,3-DIHYDROXYPROPYL (7Z)-TETRADEC-7-ENOATE NA:SODIUM ION P0G:8-[(1R)-2-{[1,1-DIMETHYL-2-(2-METHYLPHENYL)ETHYL]AMINO}-1-HYDROXYETHYL]-5-HYDROXY-2H-1,4-BENZOXAZIN-3(4H)-ONE | ||
4ldl | [AB] | [AB] | [AB] | 3.1 | 1WV:(2S)-2,3-DIHYDROXYPROPYL (7Z)-TETRADEC-7-ENOATE NA:SODIUM ION XQC:4-[(1R)-1-HYDROXY-2-{[1-(4-HYDROXYPHENYL)-2-METHYLPROPAN-2-YL]AMINO}ETHYL]BENZENE-1,2-DIOL | ||
4wgv | [A2B2] | [A2B2] | [A2B2] | 3.1 | |||
5c1m | [AB] | [AB] | [AB] | 2.07 | CLR:CHOLESTEROL OLC:(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE P6G:HEXAETHYLENE GLYCOL PO4:PHOSPHATE ION VF1:(2R,3S,3AR,5AR,6R,11BR,11CS)-3A-METHOXY-3,14-DIMETHYL-2-PHENYL-2,3,3A,6,7,11C-HEXAHYDRO-1H-6,11B-(EPIMINOETHANO)-3,5A-METHANONAPHTHO[2,1-G]INDOL-10-OL YCM:S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE | ||
5m94 | [AB] | [AB] | [AB] | 3.1 | |||
6b73 | [AB] | [AB] | [AB] | 3.1 | CLR:CHOLESTEROL CVV:N-[(5ALPHA,6BETA)-17-(CYCLOPROPYLMETHYL)-3-HYDROXY-7,8-DIDEHYDRO-4,5-EPOXYMORPHINAN-6-YL]-3-IODOBENZAMIDE OLA:OLEIC ACID | ||
6c9w | [AB] | [AB] | [AB] | 3 | 9PG:4-NITROPHENYL ALPHA-D-GALACTOPYRANOSIDE BNG:NONYL BETA-D-GLUCOPYRANOSIDE | ||
6f2g | [AB] | [AB] | [AB] | 2.92 | ZN:ZINC ION | ||
6gs4 | [AB] | [AB] | [AB] | 2.65 | F9E:[(2~{S})-2-[(2-AZANYL-6-OXIDANYLIDENE-3~{H}-PURIN-9-YL)METHOXY]-3-OXIDANYL-PROPYL] (2~{S})-2-AZANYL-3-METHYL-BUTANOATE LMT:DODECYL-BETA-D-MALTOSIDE | ||
6h7j | [ABC] | [ABC] | [ABC] | 2.8 | 2CV:HEGA-10 5FW:ISOPRENALINE NA:SODIUM ION | ||
6hjx | [A5BCDEF] | [A5BCDEF] | [A5BCDEF] | 2.5 | LMT:DODECYL-BETA-D-MALTOSIDE MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID NA:SODIUM ION P6G:HEXAETHYLENE GLYCOL PTY:PHOSPHATIDYLETHANOLAMINE | ||
6mxt | [AB] | [AB] | [AB] | 2.96 | HTO:HEPTANE-1,2,3-TRIOL K5Y:SALMETEROL MG:MAGNESIUM ION NI:NICKEL (II) ION OLA:OLEIC ACID OLC:(2R)-2,3-DIHYDROXYPROPYL (9Z)-OCTADEC-9-ENOATE P33:3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL YCM:S-(2-AMINO-2-OXOETHYL)-L-CYSTEINE | ||
6oyh | [AB] | [AB] | [AB] | 2.95 | NK4:(5S)-5___sq___-O-(5-AMINO-5-DEOXY-BETA-D-RIBOFURANOSYL)-5___sq___-C-[(2S,5S,6S)-5-CARBOXY-6-HEPTADECYL-1,4-DIMETHYL-3-OXO-1,4-DIAZEPAN-2-YL]URIDINE | ||
6qgw | [AB] | [AB] | [AB] | 1.94 | C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | ||
6qgx | [AB] | [AB] | [AB] | 2.2 | C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | ||
6qgy | [AB] | [AB] | [AB] | 2.51 | C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | ||
6ssi | [A5B5] | [A5B5] | [A5B5] | 2.59 | ABU:GAMMA-AMINO-BUTANOIC ACID ACT:ACETATE ION CA:CALCIUM ION GOL:GLYCEROL MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID PG4:TETRAETHYLENE GLYCOL UMQ:UNDECYL-MALTOSIDE | ||
6vbg | [AB] | [AB] | [AB] | 2.8 | BNG:NONYL BETA-D-GLUCOPYRANOSIDE GAL:BETA-D-GALACTOPYRANOSE YIO:1-THIO-BETA-D-GALACTOPYRANOSE | ||
6x19 | [ABCDE] | [ABCDE] | [ABCDE] | ELECTRON MICROSCOPY 2.1 |
UK1:3-{(1S)-1-[5-(2,2-DIMETHYLMORPHOLIN-4-YL)-2-{(4S)-2-(4-FLUORO-3,5-DIMETHYLPHENYL)-3-[3-(4-FLUORO-1-METHYL-1H-INDAZOL-5-YL)-2-OXO-2,3-DIHYDRO-1H-IMIDAZOL-1-YL]-4-METHYL-2,4,6,7-TETRAHYDRO-5H-PYRAZOLO[4,3-C]PYRIDINE-5-CARBONYL}-1H-INDOL-1-YL]BUTYL}-1,2,4-OXADIAZOL-5(4H)-ONE | ||
6x1a | [ABCDE] | [ABCDE] | [ABCDE] | ELECTRON MICROSCOPY 2.5 |
UK4:2-[(4-{6-[(4-CYANO-2-FLUOROPHENYL)METHOXY]PYRIDIN-2-YL}PIPERIDIN-1-YL)METHYL]-1-{[(2S)-OXETAN-2-YL]METHYL}-1H-BENZIMIDAZOLE-6-CARBOXYLIC ACID | ||
6xox | [ABCDEF] | [ABCDEF] | [ABCDEF] | ELECTRON MICROSCOPY 3.1 |
V6G:3-[(1S,2S)-1-(5-[(4S)-2,2-DIMETHYLOXAN-4-YL]-2-{(4S)-2-(4-FLUORO-3,5-DIMETHYLPHENYL)-3-[3-(4-FLUORO-1-METHYL-1H-INDAZOL-5-YL)-2-OXO-2,3-DIHYDRO-1H-IMIDAZOL-1-YL]-4-METHYL-2,4,6,7-TETRAHYDRO-5H-PYRAZOLO[4,3-C]PYRIDINE-5-CARBONYL}-1H-INDOL-1-YL)-2-METHYLCYCLOPROPYL]-1,2,4-OXADIAZOL-5(4H)-ONE | ||
6zg3 | [ABCDE] | [ABCDE] | [ABCDE] | 2.8 | CIT:CITRIC ACID LMT:DODECYL-BETA-D-MALTOSIDE PEG:DI(HYDROXYETHYL)ETHER | ||
7ckz | [ABCDE] | [ABCDE] | [ABCDE] | ELECTRON MICROSCOPY 3.1 |
CLR:CHOLESTEROL G4C:2-[2,6-BIS(CHLORANYL)PHENYL]-1-[(1S,3R)-3-(HYDROXYMETHYL)-1-METHYL-5-(3-METHYL-3-OXIDANYL-BUTYL)-3,4-DIHYDRO-1H-ISOQUINOLIN-2-YL]ETHANONE LDP:L-DOPAMINE | ||
7jjo | [ABCDE] | [ABCDE] | [ABCDE] | ELECTRON MICROSCOPY 2.6 |
5FW:ISOPRENALINE | ||
7kh0 | [ABCDEF][a] | [ABCDEF][a] | [ABCDEF][a] | ELECTRON MICROSCOPY 2.8 |
NH2:AMINO GROUP |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA