- Classes: Membrane and cell surface proteins and peptides
- Folds: LYR proteins from mammalian respiratory complex I
- Superfamilies: LYR protein-like
- Families: LYR proteins
- Protein Domains: LYR motif-containing protein 4
- Species: Human (Homo sapiens) [TaxId: 9606]
PDB Entries
| PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
|---|---|---|---|---|---|---|---|---|
| Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
| 5usr |  | [A2B2C2] | [A2B2C2] | [A2B2C2] | 3.09 | 8Q1:S-[2-({N-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECANETHIOATE LLP:(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC ACID | ||
| 5wgb | [ABC] | [ABC] | [ABC] | 2.75 | 8Q1:S-[2-({N-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECANETHIOATE PLP:PYRIDOXAL-5___sq___-PHOSPHATE | |||
| 5wkp | [A2B2C2D2] | [A2B2C2D2] | [A2B2C2D2] | 3.15 | 8Q1:S-[2-({N-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECANETHIOATE PLP:PYRIDOXAL-5___sq___-PHOSPHATE | |||
| 6odd | [A2B2] | [A2B2] | [A2B2] | 2 | 8Q1:S-[2-({N-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECANETHIOATE CA:CALCIUM ION | |||
| 6uxe | | [A2B2C2D2] | [A2B2C2D2] | [A2B2C2D2] | 1.57 | 1PE:PENTAETHYLENE GLYCOL 8Q1:S-[2-({N-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECANETHIOATE DTT:2,3-DIHYDROXY-1,4-DITHIOBUTANE EDO:1,2-ETHANEDIOL EDT:{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID GOL:GLYCEROL MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID P15:2,5,8,11,14,17-HEXAOXANONADECAN-19-OL PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL PLP:PYRIDOXAL-5___sq___-PHOSPHATE | ||
| 6w1d | [A2B2C2D2] | [A2B2C2D2] | [A2B2C2D2] | 1.8 | 1PE:PENTAETHYLENE GLYCOL 8Q1:S-[2-({N-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECANETHIOATE DTT:2,3-DIHYDROXY-1,4-DITHIOBUTANE EDO:1,2-ETHANEDIOL EDT:{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID GOL:GLYCEROL MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID P15:2,5,8,11,14,17-HEXAOXANONADECAN-19-OL PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL PLP:PYRIDOXAL-5___sq___-PHOSPHATE | |||
| 6wi2 | [ABCD] | [ABCD] | [ABCD] | 1.95 | 1PE:PENTAETHYLENE GLYCOL 8Q1:S-[2-({N-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECANETHIOATE EDO:1,2-ETHANEDIOL EDT:{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID ETE:2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL GOL:GLYCEROL MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL PLP:PYRIDOXAL-5___sq___-PHOSPHATE | |||
| 6wih | | [ABCD] | [ABCD] | [ABCD] | 1.9 | 1PE:PENTAETHYLENE GLYCOL 8Q1:S-[2-({N-[(2R)-2-HYDROXY-3,3-DIMETHYL-4-(PHOSPHONOOXY)BUTANOYL]-BETA-ALANYL}AMINO)ETHYL] DODECANETHIOATE EDO:1,2-ETHANEDIOL EDT:{[-(BIS-CARBOXYMETHYL-AMINO)-ETHYL]-CARBOXYMETHYL-AMINO}-ACETIC ACID GOL:GLYCEROL P15:2,5,8,11,14,17-HEXAOXANONADECAN-19-OL PEG:DI(HYDROXYETHYL)ETHER PG4:TETRAETHYLENE GLYCOL PGE:TRIETHYLENE GLYCOL PLP:PYRIDOXAL-5___sq___-PHOSPHATE | ||
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
