SCOPe

Classes: Peptides
Folds: Transmembrane helical fragments
Superfamilies: Transmembrane helical fragments
Families: Transmembrane helical fragments

Protein Domains:

ASLV fusion peptide
- Rous sarcoma virus [TaxId: 11886] :
  [a]
Active domain of protein icp47
- Herpes simplex virus type 1, strain 17 [TaxId: 10298] :
  [A]
Amphipathic domain of YopD
- Synthetic, Yersinia pestis-based :
  [a]
BH3 domain of proapoptotic protein Bim
- Mouse (Mus musculus) [TaxId: 10090] :
  [AB]
Bacteriorhodopsin fragments
- Halobacterium halobium [TaxId: 2242] :
  [A]
Band 3
- Synthetic peptides based on human band 3 sequence :
  [a], [A]
Cystic fibrosis transmembrane conductance regulator
- Synthetic :
  [a]
Cytoplasmic domain of p23
- Synthetic, based on Oryctolagus cuniculus sequence :
  [a4], [a]
Dimeric transmembrane domain of glycophorin A
- Human (Homo sapiens) [TaxId: 9606] :
  [A2]
F1F0 ATP synthase subunit C fragments
- Escherichia coli [TaxId: 562] :
  [A]
Glycine receptor alpha-1 chain
- Human (Homo sapiens) [TaxId: 9606] :
  [A], [a]
Matrix protein M2 transmembrane peptide
- Influenza A virus, different strains [TaxId: 11320] :
  [A4]
- Synthetic, Inluenza A virus-based :
  [a4], [a]
Membrane anchor domain of the nonstructural protein 5a (NS5a)
- Hepatitis C virus [TaxId: 11103] :
  [A]
Membrane binding peptide of semliki forest virus mRNA capping enzyme nsp1
- Synthetic :
  [a]
Membrane domain of the subunit b of ATP synthase
- Escherichia coli [TaxId: 562] :
  [A]
Membrane spanning segment 2 (M2) of the acetylcholine receptor
- Norway rat (Rattus norvegicus) [TaxId: 10116] :
  [a]
- Pacific electric ray (Torpedo californica) [TaxId: 7787] :
  [a5], ---
N-terminal membrane anchor of the glucose-specific IIa component
- Escherichia coli [TaxId: 562] :
  [a]
Neu/erbb-2 membrane spanning segment
- Synthetic, based on Rattus norvegicus sequence :
  [A]
Pheromone alpha factor receptor
- Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] :
  [a]
Potassium channel fragment L45
- Fruit fly (Drosophila melanogaster) [TaxId: 7227] :
  [a]
Pulmonary surfactant-associated polypeptide C (SP-C)
- Pig (Sus scrofa) [TaxId: 9823] :
  [A]
Rhodopsin fragments
- Synthetic, based on Bos taurus sequence :
  [A], [a]
Sarcolipin
- Synthetic :
  [A]
Second repeat (is2mic) from voltage-gated sodium channel
- Synthetic, based on Rattus norvegicus sequence :
  [a]
Surfactant Protein B (SP-B) miniprotein constructs
- Synthetic, based on Homo sapiens sequence :
  [a], [A]
Transmembrane segment 2 of NMDA receptor NR1
- Human (Homo sapiens) [TaxId: 9606] :
  [a]
Vpu protein
- Human immunodeficiency virus type 1, HIV-1 [TaxId: 11676] :
  [A]
alpha-subunit of nicotinic acetylcholine receptor
- Synthetic, based on Torpedo californica sequence :
  [a]
beta-Adrenoreceptor
- Turkey (Meleagris gallopavo) [TaxId: 9103] :
  [a]
fragment of hepatitis C envelope glycoprotein E (residues 350-370)
- Synthetic :
  [a]

* [ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
* ( ) : Nucleic acid - (AB) : DNA, (ab) : RNA

PDL