- Classes: Alpha and beta proteins (a+b)
- Folds: beta-Grasp (ubiquitin-like)
- Superfamilies: Ubiquitin-like
- Families: Ubiquitin-related
- Protein Domains: automated matches
- Species: Human (Homo sapiens) [TaxId: 9606]
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1wyw | [AB] | [AB] | [AB] | 2.1 | CL:CHLORIDE ION MG:MAGNESIUM ION NA:SODIUM ION | |||
1xqq | [A] | [A] | [A] | SOLUTION NMR | ||||
1y8r | [ABC] | [ABC] | [ABC] | 2.75 | ATP:ADENOSINE-5___sq___-TRIPHOSPHATE MG:MAGNESIUM ION ZN:ZINC ION | |||
1z5s | [ABCD] | [ABCD] | [ABCD] | 3.01 | ||||
2awt | [A] | [A] | [A] | SOLUTION NMR | ||||
2bgf | --- | --- | --- | SOLUTION NMR | ||||
2bkr | [AB] | [AB] | [AB] | 1.9 | ||||
2c9w | [ABC] | [ABC] | [ABC] | 1.9 | NI:NICKEL (II) ION SO4:SULFATE ION | |||
2d07 | [AB] | [AB] | [AB] | 2.1 | ||||
2g4d | [AB] | [AB] | [AB] | 2.8 | ||||
2gbj | [A] | [A] | [A] | 1.35 | ||||
2gbk | [A] | [A] | [A] | 1.99 | ||||
2gbm | [A] | [A] | [A] | 1.55 | ARS:ARSENIC | |||
2gbn | [A] | [A] | [A] | 1.6 | ||||
2gbr | [A] | [A] | [A] | 2 | CD:CADMIUM ION | |||
2io1 | [AB] | [AB] | [AB] | 2.6 | ||||
2izv | [ABC] | [ABC] | [ABC] | 2.55 | CL:CHLORIDE ION EDO:1,2-ETHANEDIOL NA:SODIUM ION | |||
2jz3 | [ABC] | [ABC] | [ABC] | SOLUTION NMR | ||||
2klg | [A] | [A] | [A] | SOLUTION NMR | ||||
2kx3 | [A] | [A] | [A] | SOLUTION NMR | ||||
2l0t | [AB] | [AB] | [AB] | SOLUTION NMR | ||||
2lgd | [A] | [A] | [A] | SOLUTION NMR | ||||
2lj5 | [A] | [A] | [A] | SOLUTION NMR | ||||
2m0x | [A] | [A] | [A] | SOLUTION NMR | ||||
2m17 | [A] | [A] | [A] | SOLUTION NMR | NH2:AMINO GROUP | |||
2mjb | [A] | [A] | [A] | SOLUTION NMR | ||||
2n1w | [A] | [A] | [A] | SOLUTION NMR | ||||
2nbd | [A] | [A] | [A] | SOLUTION NMR | ||||
2nbe | [A] | [A] | [A] | SOLUTION NMR | ||||
2nr2 | [A] | [A] | [A] | SOLUTION NMR | ||||
2o6v | [A2BC] | [A4] | [A4] | 2.2 | MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID SLZ:L-THIALYSINE SO4:SULFATE ION | |||
2pe9 | [A2] | [A2] | [A2] | SOLUTION NMR | ||||
2pea | [A2] | [A2] | [A2] | SOLUTION NMR | ||||
2w9n | [A] | [A] | [A] | 2.25 | CL:CHLORIDE ION FME:N-FORMYLMETHIONINE ZN:ZINC ION | |||
2wyq | [A2] | [A2] | [A2] | 1.65 | SO4:SULFATE ION | |||
2xk5 | [AB] | [A2] | [A2] | 3 | ZN:ZINC ION | |||
2y5b | [AB] | [AB] | [AB] | 2.7 | GLZ:AMINO-ACETALDEHYDE SO4:SULFATE ION ZN:ZINC ION | |||
2zcb | [A] | [A] | [A] | 1.6 | ZN:ZINC ION | |||
2zvn | [A2B2] | [A2B2] | [A2B2] | 3 | ||||
2zvo | [A2B2] | [A2B2] | [A2B2] | 2.9 | ||||
3jsv | [A2BC] | [A2B2] | [A2B2] | 2.7 | ||||
3k9p | [AB] | [AB] | [AB] | 2.8 | ||||
3nob | [A2] | [A2] | [A2] | 2.19 | SO4:SULFATE ION | |||
3phd | [A4B4] | [A4B4] | [A4B4] | 3 | ZN:ZINC ION | |||
3pse | [AB] | [AB] | [AB] | 2.3 | 3CN:3-AMINOPROPANE GOL:GLYCEROL | |||
3r66 | [A2B2] | [A2B2] | [A2B2] | 2.3 | CSD:3-SULFINOALANINE | |||
3rt3 | [A2B2] | [A2B2] | [A2B2] | 2.01 | SIN:SUCCINIC ACID | |||
3rzw | [AB] | [AB] | [AB] | 2.15 | GOL:GLYCEROL | |||
3sdl | [A2B2] | [A2B2] | [A2B2] | 2.29 | ||||
3uin | [ABCD] | [ABCD] | [ABCD] | 2.6 | ||||
3uio | [ABCD] | [ABCD] | [ABCD] | 2.6 | CSD:3-SULFINOALANINE | |||
3zkj | [ABC] | [ABC] | [ABC] | 2.58 | CL:CHLORIDE ION EDO:1,2-ETHANEDIOL PEG:DI(HYDROXYETHYL)ETHER | |||
3znz | [AB] | [AB] | [AB] | 1.9 | SO4:SULFATE ION | |||
3zo5 | [AB] | [AB] | [AB] | 2.15 | ||||
4ap4 | [A2B2C] | [A2B2C] | [A2B2C] | 2.21 | ZN:ZINC ION | |||
4auq | [A2B2C2] | [A2B2C2] | [A2B2C2] | 2.18 | ZN:ZINC ION | |||
4b95 | [ABC] | [ABC] | [ABC] | 2.8 | ACT:ACETATE ION UCK:(2S,4R)-1-(2-CHLOROPHENYL)CARBONYL-N-[(4-CHLOROPHENYL)METHYL]-4-OXIDANYL-PYRROLIDINE-2-CARBOXAMIDE | |||
4bkg | [A2] | [A2] | [A2] | 2.11 | ||||
4boz | [AB] | [AB] | [AB] | 3.03 | GOL:GLYCEROL | |||
4dwf | [A] | [A] | [A] | 1.8 | MSE:SELENOMETHIONINE SO4:SULFATE ION | |||
4eew | [A] | [A] | [A] | 1.3 | ||||
4hjk | [A] | [A] | [A] | 1.78 | PO4:PHOSPHATE ION | |||
4hk2 | [A] | [A] | [A] | 1.4 | SO4:SULFATE ION | |||
4icu | [A] | [A] | [A] | 2.4 | ||||
4icv | [A] | [A] | [A] | 1.45 | PR:PRASEODYMIUM ION | |||
4msm | [AB] | [AB] | [AB] | 1.74 | EDO:1,2-ETHANEDIOL PO4:PHOSPHATE ION ZN:ZINC ION | |||
4msq | [AB] | [AB] | [AB] | 1.95 | EDO:1,2-ETHANEDIOL PO4:PHOSPHATE ION ZN:ZINC ION | |||
4pig | [A] | [A] | [A] | 1.95 | CA:CALCIUM ION CL:CHLORIDE ION NA:SODIUM ION | |||
4pih | [A] | [A] | [A] | 1.5 | CA:CALCIUM ION CL:CHLORIDE ION | |||
4pij | [A] | [A] | [A] | 1.5 | GOL:GLYCEROL SO4:SULFATE ION | |||
4pqt | [A] | [A] | [A] | 2.05 | EDO:1,2-ETHANEDIOL ZN:ZINC ION | |||
4r62 | [AB] | [AB] | [AB] | 2.28 | ACT:ACETATE ION | |||
4s1z | [AB] | [AB] | [AB] | 3.03 | ZN:ZINC ION | |||
4v3k | [ABC] | [ABC] | [ABC] | 2.04 | CL:CHLORIDE ION EDO:1,2-ETHANEDIOL ZN:ZINC ION | |||
4v3l | [A2BC] | [A2BC] | [A2BC] | 1.53 | EDO:1,2-ETHANEDIOL ZN:ZINC ION | |||
4wjn | [A][a] | [A][a] | [A][a] | 1.5 | SEP:PHOSPHOSERINE | |||
4wjo | [A][a] | [A][a] | [A][a] | 1.46 | ||||
5af4 | [A2] | [A2] | [A2] | 1.85 | GOL:GLYCEROL SO4:SULFATE ION | |||
5af5 | [A] | [A] | [A] | 1.68 | ||||
5b7a | [A] | [A] | [A] | SOLUTION NMR | ALY:N(6)-ACETYLLYSINE | |||
5ghd | [A] | [A] | [A] | SOLUTION NMR | ALY:N(6)-ACETYLLYSINE | |||
5hpk | [AB] | [AB] | [AB] | 2.43 | ||||
5hpl | [AB] | [AB] | [AB] | 2.31 | ||||
5j26 | [AB] | [AB] | [AB] | 2.5 | ||||
5oxh | [A] | [A] | [A] | 1.6 | SEP:PHOSPHOSERINE SO4:SULFATE ION | |||
5oxi | [A] | [A] | [A] | 1.63 | SO4:SULFATE ION | |||
5v69 | [AB] | [AB] | [AB] | 2.55 | CL:CHLORIDE ION NA:SODIUM ION PGO:S-1,2-PROPANEDIOL ZN:ZINC ION | |||
5vzw | [A2B2C2] | [A2B2C2] | [A2B2C2] | 2.28 | ZN:ZINC ION | |||
6cpm | [AB] | [AB] | [AB] | 2.01 | CA:CALCIUM ION EDO:1,2-ETHANEDIOL GOL:GLYCEROL NA:SODIUM ION ZN:ZINC ION | |||
6d4p | [AB] | [AB] | [AB] | 2.11 | ||||
6d68 | [AB] | [AB] | [AB] | 2.36 | CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE | |||
6dc6 | [AB] | [AB] | [AB] | 3.14 | MG:MAGNESIUM ION POP:PYROPHOSPHATE 2- | |||
6dj9 | [A2] | [A2] | [A2] | 3.1 | ||||
6j4i | [A] | [A] | [A] | SOLUTION NMR | ||||
6nnq | [AB] | [AB] | [AB] | 2.62 | ||||
6ob1 | [ABC] | [A2B] | [A2B] | SOLUTION NMR | ||||
6uyo | [A][a] | [A][a] | [A][a] | 1.64 | ALY:N(6)-ACETYLLYSINE | |||
6uyp | [A][a] | [A][a] | [A][a] | 1.42 | ALY:N(6)-ACETYLLYSINE | |||
6uyq | [A][a] | [A][a] | [A][a] | 1.5 | ALY:N(6)-ACETYLLYSINE | |||
6uyr | [A][a] | [A][a] | [A][a] | 1.3 | ALY:N(6)-ACETYLLYSINE | |||
6uys | [A][a] | [A][a] | [A][a] | 1.59 | ALY:N(6)-ACETYLLYSINE SEP:PHOSPHOSERINE | |||
6uyt | [A][a] | [A][a] | [A][a] | 1.66 | ALY:N(6)-ACETYLLYSINE SEP:PHOSPHOSERINE | |||
6uyu | [A][a] | [A][a] | [A][a] | 1.66 | ALY:N(6)-ACETYLLYSINE SEP:PHOSPHOSERINE | |||
6uyv | [A][a] | [A][a] | [A][a] | 1.4 | ALY:N(6)-ACETYLLYSINE SEP:PHOSPHOSERINE | |||
6uyx | [A][a] | [A][a] | [A][a] | 1.7 | ALY:N(6)-ACETYLLYSINE SEP:PHOSPHOSERINE | |||
6uyy | [A][a] | [A][a] | [A][a] | 1.6 | ALY:N(6)-ACETYLLYSINE SEP:PHOSPHOSERINE | |||
6uyz | [A][a] | [A][a] | [A][a] | 1.4 | ALY:N(6)-ACETYLLYSINE SEP:PHOSPHOSERINE | |||
6v7p | [A][a] | [A][a] | [A][a] | 1.4 | ||||
6v7q | [A][a] | [A][a] | [A][a] | 1.35 | SEP:PHOSPHOSERINE | |||
6v7r | [A][a] | [A][a] | [A][a] | 1.55 | ALY:N(6)-ACETYLLYSINE | |||
6v7s | [A][a] | [A][a] | [A][a] | 1.47 | ALY:N(6)-ACETYLLYSINE SEP:PHOSPHOSERINE | |||
6xog | [ABC] | [ABC] | [ABC] | 1.98 | SO4:SULFATE ION VAY:{(1R,2R,3S,4R)-4-[(5-{4-[(1S)-1-(6-BROMOPYRIDIN-2-YL)-1-HYDROXYETHYL]THIOPHENE-2-CARBONYL}PYRIMIDIN-4-YL)AMINO]-2,3-DIHYDROXYCYCLOPENTYL}METHYL SULFAMATE ZN:ZINC ION |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA