PDB ID : 1f06 [A]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
From front %
From back %
Move slab

Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
Title
THREE DIMENSIONAL STRUCTURE OF THE TERNARY COMPLEX OF CORYNEBACTERIUM GLUTAMICUM DIAMINOPIMELATE DEHYDROGENASE NADPH-L-2-AMINO-6-METHYLENE- PIMELATE

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
1f06
11106178 X-RAY DIFFRACTION/2.1 2NP:L-2-AMINO-6-METHYLENE-PIMELIC ACID
NDP:NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A] [A] [A]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
59556 A:1-118
A:269-320		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainDiaminopimelic acid dehydrogenase (DAPDH)Corynebacterium glutamicum [TaxId: 1718]
59557 A:119-268Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainDihydrodipicolinate reductase-likeDiaminopimelic acid dehydrogenase (DAPDH)Corynebacterium glutamicum [TaxId: 1718]
59558 B:501-618
B:769-820		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainDiaminopimelic acid dehydrogenase (DAPDH)Corynebacterium glutamicum [TaxId: 1718]
59559 B:619-768Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainDihydrodipicolinate reductase-likeDiaminopimelic acid dehydrogenase (DAPDH)Corynebacterium glutamicum [TaxId: 1718]

CATH
CATH ID Node Class Architecture Topology Homology
1f06A013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1f06A023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1f06B013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1f06B023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2