OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 1hrd [A6]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

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Slab plane

Direction	Proportion
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From back	%
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Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A
B	B
C	C
D	A
E	B
F	C

Title

GLUTAMATE DEHYDROGENASE

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
1hrd			8591026	X-RAY DIFFRACTION/1.96

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A6]	[A6]	[A6]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
33867	A:1-194	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenases	Glutamate dehydrogenase	Clostridium symbiosum [TaxId: 1512]
30219	A:195-449	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Glutamate dehydrogenase	Clostridium symbiosum [TaxId: 1512]
33868	B:1-194	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenases	Glutamate dehydrogenase	Clostridium symbiosum [TaxId: 1512]
30220	B:195-449	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Glutamate dehydrogenase	Clostridium symbiosum [TaxId: 1512]
33869	C:1-194	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenases	Glutamate dehydrogenase	Clostridium symbiosum [TaxId: 1512]
30221	C:195-449	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Glutamate dehydrogenase	Clostridium symbiosum [TaxId: 1512]

CATH

CATH ID	Node	Class	Architecture	Topology	Homology
1hrdA01	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1hrdA02	3.40.50.10860		:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
1hrdA03	1.10.285.10		:Orthogonal Bundle	:Glutamate Dehydrogenase; Chain A, domain 3	:Glutamate Dehydrogenase, chain A, domain 3
1hrdB01	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1hrdB02	3.40.50.10860		:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
1hrdB03	1.10.285.10		:Orthogonal Bundle	:Glutamate Dehydrogenase; Chain A, domain 3	:Glutamate Dehydrogenase, chain A, domain 3
1hrdC01	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1hrdC02	3.40.50.10860		:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
1hrdC03	1.10.285.10		:Orthogonal Bundle	:Glutamate Dehydrogenase; Chain A, domain 3	:Glutamate Dehydrogenase, chain A, domain 3