OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 1ihy [A4]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

Download

Slab plane

Direction	Proportion
From front	%
From back	%
Move slab

Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A
B	B
C	C
D	D

Title

GAPDH COMPLEXED WITH ADP-RIBOSE

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
1ihy			12136140	X-RAY DIFFRACTION/3	APR:ADENOSINE-5-DIPHOSPHORIBOSE SO4:SULFATE ION

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A4]	[A4]	[A4]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
71219	A:1-148 A:313-334	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)	South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
71220	A:149-312	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)	South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
71221	B:1-148 B:313-334	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)	South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
71222	B:149-312	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)	South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
71223	C:1-148 C:313-334	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)	South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
71224	C:149-312	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)	South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
71225	D:1-148 D:313-334	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)	South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
71226	D:149-312	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)	South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

CATH

CATH ID	Node	Class	Architecture	Topology	Homology
1ihyA01	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1ihyA02	3.30.360.10		:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2
1ihyB01	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1ihyB02	3.30.360.10		:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2
1ihyC01	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1ihyC02	3.30.360.10		:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2
1ihyD01	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1ihyD02	3.30.360.10		:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2