OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 1npy [A]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

Download

Slab plane

Direction	Proportion
From front	%
From back	%
Move slab

Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A

Title

STRUCTURE OF SHIKIMATE 5-DEHYDROGENASE-LIKE PROTEIN HI0607

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
1npy			15735308	X-RAY DIFFRACTION/1.75	ACE:ACETYL GROUP

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A]	[A]	[A]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
85996	A:1-102	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Shikimate dehydrogenase-like	Shikimate 5-dehydrogenase-like protein HI0607	Haemophilus influenzae [TaxId: 727]
85995	A:103-269	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Shikimate 5-dehydrogenase-like protein HI0607	Haemophilus influenzae [TaxId: 727]
85998	B:1-102	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Shikimate dehydrogenase-like	Shikimate 5-dehydrogenase-like protein HI0607	Haemophilus influenzae [TaxId: 727]
85997	B:103-270	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Shikimate 5-dehydrogenase-like protein HI0607	Haemophilus influenzae [TaxId: 727]
86000	C:1-102	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Shikimate dehydrogenase-like	Shikimate 5-dehydrogenase-like protein HI0607	Haemophilus influenzae [TaxId: 727]
85999	C:103-270	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Shikimate 5-dehydrogenase-like protein HI0607	Haemophilus influenzae [TaxId: 727]
86002	D:1-102	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Shikimate dehydrogenase-like	Shikimate 5-dehydrogenase-like protein HI0607	Haemophilus influenzae [TaxId: 727]
86001	D:103-270	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Shikimate 5-dehydrogenase-like protein HI0607	Haemophilus influenzae [TaxId: 727]

CATH

CATH ID	Node	Architecture	Topology	Homology
1npyA01	3.40.50.10860	:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
1npyA02	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1npyB01	3.40.50.10860	:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
1npyB02	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1npyC01	3.40.50.10860	:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
1npyC02	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1npyD01	3.40.50.10860	:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
1npyD02	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain