PDB ID : 1o9b [A]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

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Secondary Structure


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Slab plane

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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
Title
QUINATE/SHIKIMATE DEHYDROGENASE YDIB COMPLEXED WITH NADH

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
1o9b
12637497 X-RAY DIFFRACTION/2.5 MSE:SELENOMETHIONINE
NAI:1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
PO4:PHOSPHATE ION
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A] [A] [A]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
81237 A:107-287Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsAminoacid dehydrogenase-like, C-terminal domainPutative shikimate dehydrogenase YdiBEscherichia coli [TaxId: 562]
81238 A:7-106Alpha and beta proteins (a/b)Aminoacid dehydrogenase-like, N-terminal domainAminoacid dehydrogenase-like, N-terminal domainShikimate dehydrogenase-likePutative shikimate dehydrogenase YdiBEscherichia coli [TaxId: 562]
81239 B:107-287Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsAminoacid dehydrogenase-like, C-terminal domainPutative shikimate dehydrogenase YdiBEscherichia coli [TaxId: 562]
81240 B:7-106Alpha and beta proteins (a/b)Aminoacid dehydrogenase-like, N-terminal domainAminoacid dehydrogenase-like, N-terminal domainShikimate dehydrogenase-likePutative shikimate dehydrogenase YdiBEscherichia coli [TaxId: 562]

CATH
CATH ID Node Class Architecture Topology Homology
1o9bA013.40.50.10860:3-Layer(aba) Sandwich:Rossmann fold:Leucine Dehydrogenase, chain A, domain 1
1o9bA023.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1o9bB013.40.50.10860:3-Layer(aba) Sandwich:Rossmann fold:Leucine Dehydrogenase, chain A, domain 1
1o9bB023.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain