PDB ID : 1qki [A4]

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ARa IRb





 a AR:All Residues
 b IR:Interface Residues

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Secondary Structure


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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CC
DD
Title
X-RAY STRUCTURE OF HUMAN GLUCOSE 6-PHOSPHATE DEHYDROGENASE (VARIANT CANTON R459L) COMPLEXED WITH STRUCTURAL NADP+

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
1qki
10745013 X-RAY DIFFRACTION/3 GOA:GLYCOLIC ACID
GOL:GLYCEROL
NAP:NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A4] [A4] [A4]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
30080 A:12-199
A:435-449		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainGlucose 6-phosphate dehydrogenase, N-terminal domainHuman (Homo sapiens) [TaxId: 9606]
39995 A:200-434
A:450-511		Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainGlucose 6-phosphate dehydrogenase-likeGlucose 6-phosphate dehydrogenaseHuman (Homo sapiens) [TaxId: 9606]
30081 B:11-199
B:435-449		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainGlucose 6-phosphate dehydrogenase, N-terminal domainHuman (Homo sapiens) [TaxId: 9606]
39996 B:200-434
B:450-511		Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainGlucose 6-phosphate dehydrogenase-likeGlucose 6-phosphate dehydrogenaseHuman (Homo sapiens) [TaxId: 9606]
30082 C:11-199
C:435-449		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainGlucose 6-phosphate dehydrogenase, N-terminal domainHuman (Homo sapiens) [TaxId: 9606]
39997 C:200-434
C:450-511		Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainGlucose 6-phosphate dehydrogenase-likeGlucose 6-phosphate dehydrogenaseHuman (Homo sapiens) [TaxId: 9606]
30083 D:10-199
D:435-449		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainGlucose 6-phosphate dehydrogenase, N-terminal domainHuman (Homo sapiens) [TaxId: 9606]
39998 D:200-434
D:450-511		Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainGlucose 6-phosphate dehydrogenase-likeGlucose 6-phosphate dehydrogenaseHuman (Homo sapiens) [TaxId: 9606]
30084 E:10-199
E:435-449		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainGlucose 6-phosphate dehydrogenase, N-terminal domainHuman (Homo sapiens) [TaxId: 9606]
39999 E:200-434
E:450-511		Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainGlucose 6-phosphate dehydrogenase-likeGlucose 6-phosphate dehydrogenaseHuman (Homo sapiens) [TaxId: 9606]
40000 F:200-434
F:450-511		Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainGlucose 6-phosphate dehydrogenase-likeGlucose 6-phosphate dehydrogenaseHuman (Homo sapiens) [TaxId: 9606]
30085 F:8-199
F:435-449		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainGlucose 6-phosphate dehydrogenase, N-terminal domainHuman (Homo sapiens) [TaxId: 9606]
30086 G:10-199
G:435-449		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainGlucose 6-phosphate dehydrogenase, N-terminal domainHuman (Homo sapiens) [TaxId: 9606]
40001 G:200-434
G:450-511		Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainGlucose 6-phosphate dehydrogenase-likeGlucose 6-phosphate dehydrogenaseHuman (Homo sapiens) [TaxId: 9606]
30087 H:10-199
H:435-449		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainGlucose 6-phosphate dehydrogenase, N-terminal domainHuman (Homo sapiens) [TaxId: 9606]
40002 H:200-434
H:450-511		Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainGlucose 6-phosphate dehydrogenase-likeGlucose 6-phosphate dehydrogenaseHuman (Homo sapiens) [TaxId: 9606]

CATH
CATH ID Node Class Architecture Topology Homology
1qkiA013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1qkiA023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1qkiB013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1qkiB023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1qkiC013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1qkiC023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1qkiD013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1qkiD023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1qkiE013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1qkiE023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1qkiF013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1qkiF023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1qkiG013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1qkiG023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1qkiH013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1qkiH023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2