PDB ID : 1rpn [A]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

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Secondary Structure


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Slab plane

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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
Title
CRYSTAL STRUCTURE OF GDP-D-MANNOSE 4,6-DEHYDRATASE IN COMPLEXES WITH GDP AND NADPH

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
1rpn
14739333 X-RAY DIFFRACTION/2.15 GDP:GUANOSINE-5___sq___-DIPHOSPHATE
NDP:NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A] [A] [A]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
97708 A:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesGDP-mannose 4,6-dehydratasePseudomonas aeruginosa [TaxId: 287]
97709 B:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesGDP-mannose 4,6-dehydratasePseudomonas aeruginosa [TaxId: 287]
97710 C:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesGDP-mannose 4,6-dehydratasePseudomonas aeruginosa [TaxId: 287]
97711 D:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesGDP-mannose 4,6-dehydratasePseudomonas aeruginosa [TaxId: 287]

CATH
CATH ID Node Class Architecture Topology Homology
1rpnA013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1rpnA023.90.25.10:Alpha-Beta Complex:UDP-galactose 4-epimerase; domain 1:UDP-galactose 4-epimerase, domain 1
1rpnB013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1rpnB023.90.25.10:Alpha-Beta Complex:UDP-galactose 4-epimerase; domain 1:UDP-galactose 4-epimerase, domain 1
1rpnC013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1rpnC023.90.25.10:Alpha-Beta Complex:UDP-galactose 4-epimerase; domain 1:UDP-galactose 4-epimerase, domain 1
1rpnD013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1rpnD023.90.25.10:Alpha-Beta Complex:UDP-galactose 4-epimerase; domain 1:UDP-galactose 4-epimerase, domain 1