PDB ID : 1up7 [A4]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
From front %
From back %
Move slab

Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CC
DD
Title
STRUCTURE OF THE 6-PHOSPHO-BETA GLUCOSIDASE FROM THERMOTOGA MARITIMA AT 2.4 ANGSTROM RESOLUTION IN THE TETRAGONAL FORM WITH NAD AND GLUCOSE-6-PHOSPHATE

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
1up7
15670594 X-RAY DIFFRACTION/2.4 G6P:6-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE
NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE
SO4:SULFATE ION
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A4] [A4] [A4]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
113374 A:1-162Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsLDH N-terminal domain-like6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113375 A:163-415Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeAglA-like glucosidase6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113376 B:1-162Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsLDH N-terminal domain-like6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113377 B:163-415Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeAglA-like glucosidase6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113378 C:1-162Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsLDH N-terminal domain-like6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113379 C:163-415Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeAglA-like glucosidase6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113380 D:1-162Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsLDH N-terminal domain-like6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113381 D:163-415Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeAglA-like glucosidase6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113382 E:1-162Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsLDH N-terminal domain-like6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113383 E:163-415Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeAglA-like glucosidase6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113384 F:1-162Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsLDH N-terminal domain-like6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113385 F:163-415Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeAglA-like glucosidase6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113386 G:1-162Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsLDH N-terminal domain-like6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113387 G:163-415Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeAglA-like glucosidase6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113388 H:1-162Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsLDH N-terminal domain-like6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]
113389 H:163-415Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeAglA-like glucosidase6-phospho-beta-glucosidaseThermotoga maritima [TaxId: 2336]

CATH
CATH ID Node Class Architecture Topology Homology
1up7A013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1up7A023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
1up7B013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1up7B023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
1up7C013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1up7C023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
1up7D013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1up7D023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
1up7E013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1up7E023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
1up7F013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1up7F023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
1up7G013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1up7G023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
1up7H013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1up7H023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal