OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 1v8b [A4]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

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Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A
B	B
C	C
D	D

Title

CRYSTAL STRUCTURE OF A HYDROLASE

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
1v8b			15476817	X-RAY DIFFRACTION/2.4	ADN:ADENOSINE NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A4]	[A4]	[A4]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
113564	A:235-397	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Formate/glycerate dehydrogenases, NAD-domain	S-adenosylhomocystein hydrolase	Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
113565	A:4-234 A:398-479	Alpha and beta proteins (a/b)	Flavodoxin-like	Formate/glycerate dehydrogenase catalytic domain-like	S-adenosylhomocystein hydrolase	S-adenosylhomocystein hydrolase	Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
113566	B:235-397	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Formate/glycerate dehydrogenases, NAD-domain	S-adenosylhomocystein hydrolase	Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
113567	B:4-234 B:398-479	Alpha and beta proteins (a/b)	Flavodoxin-like	Formate/glycerate dehydrogenase catalytic domain-like	S-adenosylhomocystein hydrolase	S-adenosylhomocystein hydrolase	Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
113568	C:235-397	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Formate/glycerate dehydrogenases, NAD-domain	S-adenosylhomocystein hydrolase	Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
113569	C:4-234 C:398-479	Alpha and beta proteins (a/b)	Flavodoxin-like	Formate/glycerate dehydrogenase catalytic domain-like	S-adenosylhomocystein hydrolase	S-adenosylhomocystein hydrolase	Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
113570	D:235-397	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Formate/glycerate dehydrogenases, NAD-domain	S-adenosylhomocystein hydrolase	Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
113571	D:4-234 D:398-479	Alpha and beta proteins (a/b)	Flavodoxin-like	Formate/glycerate dehydrogenase catalytic domain-like	S-adenosylhomocystein hydrolase	S-adenosylhomocystein hydrolase	Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

CATH

CATH ID	Node	Class	Architecture	Topology	Homology
1v8bA01	3.40.50.1480		:3-Layer(aba) Sandwich	:Rossmann fold	:Adenosylhomocysteinase-like
1v8bA02	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1v8bB01	3.40.50.1480		:3-Layer(aba) Sandwich	:Rossmann fold	:Adenosylhomocysteinase-like
1v8bB02	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1v8bC01	3.40.50.1480		:3-Layer(aba) Sandwich	:Rossmann fold	:Adenosylhomocysteinase-like
1v8bC02	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1v8bD01	3.40.50.1480		:3-Layer(aba) Sandwich	:Rossmann fold	:Adenosylhomocysteinase-like
1v8bD02	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain