OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 1vkn [A4]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

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Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A
B	B
C	C
D	D

Title

CRYSTAL STRUCTURE OF N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE (TM1782) FROM THERMOTOGA MARITIMA AT 1.80 A RESOLUTION

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
1vkn			Not in PubMed	X-RAY DIFFRACTION/1.8	MSE:SELENOMETHIONINE

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A4]	[A4]	[A4]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
283449	A:0-0	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
108676	A:1-144 A:308-339	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	N-acetyl-gamma-glutamyl-phosphate reductase ArgC	Thermotoga maritima [TaxId: 2336]
108677	A:145-307	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	N-acetyl-gamma-glutamyl-phosphate reductase ArgC	Thermotoga maritima [TaxId: 2336]
283450	B:0-0	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
108678	B:1-144 B:308-339	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	N-acetyl-gamma-glutamyl-phosphate reductase ArgC	Thermotoga maritima [TaxId: 2336]
108679	B:145-307	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	N-acetyl-gamma-glutamyl-phosphate reductase ArgC	Thermotoga maritima [TaxId: 2336]
108680	C:1-144 C:308-339	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	N-acetyl-gamma-glutamyl-phosphate reductase ArgC	Thermotoga maritima [TaxId: 2336]
108681	C:145-307	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	N-acetyl-gamma-glutamyl-phosphate reductase ArgC	Thermotoga maritima [TaxId: 2336]
108682	D:1-144 D:308-339	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	N-acetyl-gamma-glutamyl-phosphate reductase ArgC	Thermotoga maritima [TaxId: 2336]
108683	D:145-307	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	N-acetyl-gamma-glutamyl-phosphate reductase ArgC	Thermotoga maritima [TaxId: 2336]

CATH

CATH ID	Node	Architecture	Topology	Homology
1vknA01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1vknA02	3.30.360.10	:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2
1vknB01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1vknB02	3.30.360.10	:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2
1vknC01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1vknC02	3.30.360.10	:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2
1vknD01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1vknD02	3.30.360.10	:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2