OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 1vl6 [A4]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

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Slab plane

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Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A
B	B
C	C
D	D

Title

CRYSTAL STRUCTURE OF NAD-DEPENDENT MALIC ENZYME (TM0542) FROM THERMOTOGA MARITIMA AT 2.61 A RESOLUTION

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
1vl6			Not in PubMed	X-RAY DIFFRACTION/2.61	MSE:SELENOMETHIONINE

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A4]	[A4]	[A4]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
283455	A:0-0	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
108725	A:1-154	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Malic enzyme N-domain	Malate oxidoreductase (malic enzyme)	Thermotoga maritima [TaxId: 2336]
108724	A:155-376	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Malate oxidoreductase (malic enzyme)	Thermotoga maritima [TaxId: 2336]
283456	B:0-0	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
108727	B:1-154	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Malic enzyme N-domain	Malate oxidoreductase (malic enzyme)	Thermotoga maritima [TaxId: 2336]
108726	B:155-376	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Malate oxidoreductase (malic enzyme)	Thermotoga maritima [TaxId: 2336]
283457	C:0-0	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
108729	C:1-154	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Malic enzyme N-domain	Malate oxidoreductase (malic enzyme)	Thermotoga maritima [TaxId: 2336]
108728	C:155-376	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Malate oxidoreductase (malic enzyme)	Thermotoga maritima [TaxId: 2336]
283458	D:0-0	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
108731	D:1-154	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	Malic enzyme N-domain	Malate oxidoreductase (malic enzyme)	Thermotoga maritima [TaxId: 2336]
108730	D:155-376	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Aminoacid dehydrogenase-like, C-terminal domain	Malate oxidoreductase (malic enzyme)	Thermotoga maritima [TaxId: 2336]

CATH

CATH ID	Node	Architecture	Topology	Homology
1vl6A01	3.40.50.10380	:3-Layer(aba) Sandwich	:Rossmann fold	:Malic enzyme, N-terminal domain
1vl6A02	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1vl6B01	3.40.50.10380	:3-Layer(aba) Sandwich	:Rossmann fold	:Malic enzyme, N-terminal domain
1vl6B02	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1vl6C01	3.40.50.10380	:3-Layer(aba) Sandwich	:Rossmann fold	:Malic enzyme, N-terminal domain
1vl6C02	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
1vl6D01	3.40.50.10380	:3-Layer(aba) Sandwich	:Rossmann fold	:Malic enzyme, N-terminal domain
1vl6D02	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain