PDB ID : 1vm6 [A4]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CC
DD
Title
CRYSTAL STRUCTURE OF DIHYDRODIPICOLINATE REDUCTASE (TM1520) FROM THERMOTOGA MARITIMA AT 2.27 A RESOLUTION

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
1vm6
Not in PubMed X-RAY DIFFRACTION/2.27 ACT:ACETATE ION
EDO:1,2-ETHANEDIOL
NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE
PG4:TETRAETHYLENE GLYCOL
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A4] [A4] [A4]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
283475 A:0-0ArtifactsTagsTagsTagsN-terminal TagsSynthetic
118631 A:1-96
A:183-214		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainDihydrodipicolinate reductaseThermotoga maritima [TaxId: 2336]
108877 A:97-182Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainDihydrodipicolinate reductase-likeDihydrodipicolinate reductaseThermotoga maritima [TaxId: 2336]
283476 B:-4-0ArtifactsTagsTagsTagsN-terminal TagsSynthetic
108878 B:1-96
B:183-213		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainDihydrodipicolinate reductaseThermotoga maritima [TaxId: 2336]
108879 B:97-182Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainDihydrodipicolinate reductase-likeDihydrodipicolinate reductaseThermotoga maritima [TaxId: 2336]
118632 C:1-96
C:183-214		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainDihydrodipicolinate reductaseThermotoga maritima [TaxId: 2336]
108881 C:97-182Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainDihydrodipicolinate reductase-likeDihydrodipicolinate reductaseThermotoga maritima [TaxId: 2336]
283477 D:-3-0ArtifactsTagsTagsTagsN-terminal TagsSynthetic
108882 D:1-96
D:183-213		Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsGlyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domainDihydrodipicolinate reductaseThermotoga maritima [TaxId: 2336]
108883 D:97-182Alpha and beta proteins (a+b)FwdE/GAPDH domain-likeGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domainDihydrodipicolinate reductase-likeDihydrodipicolinate reductaseThermotoga maritima [TaxId: 2336]

CATH
CATH ID Node Class Architecture Topology Homology
1vm6A013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1vm6A023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1vm6B013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1vm6B023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1vm6C013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1vm6C023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2
1vm6D013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
1vm6D023.30.360.10:2-Layer Sandwich:Dihydrodipicolinate Reductase; domain 2:Dihydrodipicolinate Reductase; domain 2