OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 2cvo [A4]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

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Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A
B	B
C	C
D	D

Title

CRYSTAL STRUCTURE OF PUTATIVE N-ACETYL-GAMMA-GLUTAMYL- PHOSPHATE REDUCTASE (AK071544) FROM RICE (ORYZA SATIVA)

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
2cvo			16240442	X-RAY DIFFRACTION/2.2	CSO:S-HYDROXYCYSTEINE

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A4]	[A4]	[A4]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
130878	A:219-383	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	Putative semialdehyde dehydrogenase	Rice (Oryza sativa) [TaxId: 4530]
130877	A:68-218 A:384-415	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	Putative semialdehyde dehydrogenase	Rice (Oryza sativa) [TaxId: 4530]
130880	B:219-383	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	Putative semialdehyde dehydrogenase	Rice (Oryza sativa) [TaxId: 4530]
130879	B:68-218 B:384-415	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	Putative semialdehyde dehydrogenase	Rice (Oryza sativa) [TaxId: 4530]
130882	C:219-383	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	Putative semialdehyde dehydrogenase	Rice (Oryza sativa) [TaxId: 4530]
130881	C:68-218 C:384-415	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	Putative semialdehyde dehydrogenase	Rice (Oryza sativa) [TaxId: 4530]
130884	D:219-383	Alpha and beta proteins (a+b)	FwdE/GAPDH domain-like	Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain	GAPDH-like	Putative semialdehyde dehydrogenase	Rice (Oryza sativa) [TaxId: 4530]
130883	D:71-218 D:384-415	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain	Putative semialdehyde dehydrogenase	Rice (Oryza sativa) [TaxId: 4530]

CATH

CATH ID	Node	Architecture	Topology	Homology
2cvoA01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
2cvoA02	3.30.360.10	:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2
2cvoB01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
2cvoB02	3.30.360.10	:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2
2cvoC01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
2cvoC02	3.30.360.10	:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2
2cvoD01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
2cvoD02	3.30.360.10	:2-Layer Sandwich	:Dihydrodipicolinate Reductase; domain 2	:Dihydrodipicolinate Reductase; domain 2