PDB ID : 2jfg [A]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
Title
CRYSTAL STRUCTURE OF MURD LIGASE IN COMPLEX WITH UMA AND ADP

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
2jfg
17507028 X-RAY DIFFRACTION/1.52 ADP:ADENOSINE-5___sq___-DIPHOSPHATE
KCX:LYSINE NZ-CARBOXYLIC ACID
SO4:SULFATE ION
UMA:URIDINE-5___sq___-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A] [A] [A]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
138306 A:1-93Alpha and beta proteins (a/b)MurCD N-terminal domainMurCD N-terminal domainautomated matchesautomated matchesEscherichia coli [TaxId: 562]
138307 A:298-437Alpha and beta proteins (a/b)MurD-like peptide ligases, peptide-binding domainMurD-like peptide ligases, peptide-binding domainautomated matchesautomated matchesEscherichia coli [TaxId: 562]
288078 A:438-440ArtifactsTagsTagsTagsC-terminal TagsSynthetic
138308 A:94-297Alpha and beta proteins (a/b)Ribokinase-likeMurD-like peptide ligases, catalytic domainMurCDEFautomated matchesEscherichia coli [TaxId: 562]

CATH
CATH ID Node Class Architecture Topology Homology
2jfgA013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
2jfgA023.40.1190.10:3-Layer(aba) Sandwich:UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase:Mur-like, catalytic domain
2jfgA033.90.190.20:Alpha-Beta Complex:Protein-Tyrosine Phosphatase; Chain A:Mur ligase, C-terminal domain