PDB ID : 2nu8 [A2B2]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CA
DB
Title
C123AT MUTANT OF E. COLI SUCCINYL-COA SYNTHETASE

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
2nu8
17642514 X-RAY DIFFRACTION/2.15 COA:COENZYME A
GOL:GLYCEROL
PO4:PHOSPHATE ION
SO4:SULFATE ION
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A2B2] [A2B2] [A2B2]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
148412 A:1-121Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsCoA-binding domainSuccinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domainEscherichia coli [TaxId: 562]
148413 A:122-287Alpha and beta proteins (a/b)Flavodoxin-likeSuccinyl-CoA synthetase domainsSuccinyl-CoA synthetase domainsSuccinyl-CoA synthetase, alpha-chain, C-terminal domainEscherichia coli [TaxId: 562]
148415 B:1-238Alpha and beta proteins (a+b)ATP-graspGlutathione synthetase ATP-binding domain-likeSuccinyl-CoA synthetase, beta-chain, N-terminal domainSuccinyl-CoA synthetase, beta-chain, N-terminal domainEscherichia coli [TaxId: 562]
148414 B:239-388Alpha and beta proteins (a/b)Flavodoxin-likeSuccinyl-CoA synthetase domainsSuccinyl-CoA synthetase domainsSuccinyl-CoA synthetase, beta-chain, C-terminal domainEscherichia coli [TaxId: 562]
148416 D:1-121Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsCoA-binding domainSuccinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domainEscherichia coli [TaxId: 562]
148417 D:122-287Alpha and beta proteins (a/b)Flavodoxin-likeSuccinyl-CoA synthetase domainsSuccinyl-CoA synthetase domainsSuccinyl-CoA synthetase, alpha-chain, C-terminal domainEscherichia coli [TaxId: 562]
148419 E:1-238Alpha and beta proteins (a+b)ATP-graspGlutathione synthetase ATP-binding domain-likeSuccinyl-CoA synthetase, beta-chain, N-terminal domainSuccinyl-CoA synthetase, beta-chain, N-terminal domainEscherichia coli [TaxId: 562]
148418 E:239-385Alpha and beta proteins (a/b)Flavodoxin-likeSuccinyl-CoA synthetase domainsSuccinyl-CoA synthetase domainsSuccinyl-CoA synthetase, beta-chain, C-terminal domainEscherichia coli [TaxId: 562]

CATH
CATH ID Node Class Architecture Topology Homology
2nu8A013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
2nu8A023.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains
2nu8B013.30.470.20:2-Layer Sandwich:D-amino Acid Aminotransferase; Chain A, domain 1:ATP-grasp fold, B domain
2nu8B023.30.1490.20:2-Layer Sandwich:Dna Ligase; domain 1:ATP-grasp fold, A domain
2nu8B033.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains
2nu8D013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
2nu8D023.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains
2nu8E013.30.470.20:2-Layer Sandwich:D-amino Acid Aminotransferase; Chain A, domain 1:ATP-grasp fold, B domain
2nu8E023.30.1490.20:2-Layer Sandwich:Dna Ligase; domain 1:ATP-grasp fold, A domain
2nu8E033.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains