PDB ID : 2uup [A]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
Title
CRYSTAL STRUCTURE OF MURD LIGASE IN COMPLEX WITH D-GLU CONTAINING SULFONAMIDE INHIBITOR

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
2uup
19007109 X-RAY DIFFRACTION/1.88 KCX:LYSINE NZ-CARBOXYLIC ACID
LK4:N-({6-[(4-CYANOBENZYL)OXY]NAPHTHALEN-2-YL}SULFONYL)-D-GLUTAMIC ACID
SO4:SULFATE ION
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A] [A] [A]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
152200 A:1-93Alpha and beta proteins (a/b)MurCD N-terminal domainMurCD N-terminal domainautomated matchesautomated matchesEscherichia coli [TaxId: 562]
152201 A:298-437Alpha and beta proteins (a/b)MurD-like peptide ligases, peptide-binding domainMurD-like peptide ligases, peptide-binding domainautomated matchesautomated matchesEscherichia coli [TaxId: 562]
289743 A:438-440ArtifactsTagsTagsTagsC-terminal TagsSynthetic
152202 A:94-297Alpha and beta proteins (a/b)Ribokinase-likeMurD-like peptide ligases, catalytic domainMurCDEFautomated matchesEscherichia coli [TaxId: 562]

CATH
CATH ID Node Class Architecture Topology Homology
2uupA013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
2uupA023.40.1190.10:3-Layer(aba) Sandwich:UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase:Mur-like, catalytic domain
2uupA033.90.190.20:Alpha-Beta Complex:Protein-Tyrosine Phosphatase; Chain A:Mur ligase, C-terminal domain