PDB ID : 2v6b [A4]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CC
DD
Title
CRYSTAL STRUCTURE OF LACTATE DEHYDROGENASE FROM DEINOCOCCUS RADIODURANS (APO FORM)

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
2v6b
17936781 X-RAY DIFFRACTION/2.5
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A4] [A4] [A4]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
206240 A:165-324Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeautomated matchesautomated matchesDeinococcus radiodurans [TaxId: 1299]
206239 A:22-164Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesDeinococcus radiodurans [TaxId: 1299]
206242 B:165-326Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeautomated matchesautomated matchesDeinococcus radiodurans [TaxId: 1299]
206241 B:22-164Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesDeinococcus radiodurans [TaxId: 1299]
206244 C:165-326Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeautomated matchesautomated matchesDeinococcus radiodurans [TaxId: 1299]
206243 C:22-164Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesDeinococcus radiodurans [TaxId: 1299]
206246 D:165-325Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeautomated matchesautomated matchesDeinococcus radiodurans [TaxId: 1299]
206245 D:22-164Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesDeinococcus radiodurans [TaxId: 1299]

CATH
CATH ID Node Class Architecture Topology Homology
2v6bA013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
2v6bA023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
2v6bB013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
2v6bB023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
2v6bC013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
2v6bC023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
2v6bD013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
2v6bD023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal