PDB ID : 2x5o [A]
Color
ARa IRb
|
|
a AR:All Residues
b IR:Interface Residues
b IR:Interface Residues
Slab plane
Title
DISCOVERY OF NOVEL 5-BENZYLIDENERHODANINE- AND 5-BENZYLIDENE- THIAZOLIDINE-2,4-DIONE INHIBITORS OF MURD LIGASE
Structure Summary
| PDB ID | Mutant | OPM | Pub Med | Method/Resolution | HETNAM |
|---|---|---|---|---|---|
| 2x5o | 20804196 | X-RAY DIFFRACTION/1.46 | AZI:AZIDE ION CL:CHLORIDE ION KCX:LYSINE NZ-CARBOXYLIC ACID SO3:SULFITE ION SO4:SULFATE ION VSV:N-({3-[({4-[(Z)-(2,4-DIOXO-1,3-THIAZOLIDIN-5-YLIDENE)METHYL]PHENYL}AMINO)METHYL]PHENYL}CARBONYL)-D-GLUTAMICACID |
| Chain Formula | ||
|---|---|---|
| Amino Acid sequence | SCOPe Family Level | CATH Homology Level |
| [A] | [A] | [A] |
Structual Classification
SCOPe
| SCOPe ID | Chain | Class | Fold | Superfamily | Family | Protein Domain | Species |
|---|---|---|---|---|---|---|---|
| 244425 | A:1-93 | Alpha and beta proteins (a/b) | MurCD N-terminal domain | MurCD N-terminal domain | automated matches | automated matches | Escherichia coli [TaxId: 668369] |
| 244427 | A:298-437 | Alpha and beta proteins (a/b) | MurD-like peptide ligases, peptide-binding domain | MurD-like peptide ligases, peptide-binding domain | automated matches | automated matches | Escherichia coli [TaxId: 668369] |
| 290152 | A:438-439 | Artifacts | Tags | Tags | Tags | C-terminal Tags | Synthetic |
| 244426 | A:94-297 | Alpha and beta proteins (a/b) | Ribokinase-like | MurD-like peptide ligases, catalytic domain | MurCDEF | automated matches | Escherichia coli [TaxId: 668369] |
CATH
| CATH ID | Node | Class | Architecture | Topology | Homology |
|---|---|---|---|---|---|
| 2x5oA01 | 3.40.50.720 | :3-Layer(aba) Sandwich | :Rossmann fold | :NAD(P)-binding Rossmann-like Domain | |
| 2x5oA02 | 3.40.1190.10 | :3-Layer(aba) Sandwich | :UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | :Mur-like, catalytic domain | |
| 2x5oA03 | 3.90.190.20 | :Alpha-Beta Complex | :Protein-Tyrosine Phosphatase; Chain A | :Mur ligase, C-terminal domain |
