PDB ID : 2yfq [A6]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
From front %
From back %
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CA
DB
EA
FB
Title
CRYSTAL STRUCTURE OF GLUTAMATE DEHYDROGENASE FROM PEPTONIPHILUS ASACCHAROLYTICUS

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
2yfq
22068154 X-RAY DIFFRACTION/2.94 SO4:SULFATE ION
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A6] [A6] [A6]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
207571 A:181-421Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesPeptoniphilus asaccharolyticus [TaxId: 1258]
207570 A:6-180Alpha and beta proteins (a/b)Aminoacid dehydrogenase-like, N-terminal domainAminoacid dehydrogenase-like, N-terminal domainautomated matchesautomated matchesPeptoniphilus asaccharolyticus [TaxId: 1258]
207573 B:181-421Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesPeptoniphilus asaccharolyticus [TaxId: 1258]
207572 B:5-180Alpha and beta proteins (a/b)Aminoacid dehydrogenase-like, N-terminal domainAminoacid dehydrogenase-like, N-terminal domainautomated matchesautomated matchesPeptoniphilus asaccharolyticus [TaxId: 1258]

CATH
CATH ID Node Class Architecture Topology Homology
2yfqA011.10.8.1210:Orthogonal Bundle:Helicase, Ruva Protein; domain 3:
2yfqA023.40.50.10860:3-Layer(aba) Sandwich:Rossmann fold:Leucine Dehydrogenase, chain A, domain 1
2yfqA033.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
2yfqB011.10.8.1210:Orthogonal Bundle:Helicase, Ruva Protein; domain 3:
2yfqB023.40.50.10860:3-Layer(aba) Sandwich:Rossmann fold:Leucine Dehydrogenase, chain A, domain 1
2yfqB033.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain