OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 3cky [A4]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

Download

Slab plane

Direction	Proportion
From front	%
From back	%
Move slab

Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A
B	B
C	C
D	D

Title

STRUCTURAL AND KINETIC PROPERTIES OF A BETA-HYDROXYACID DEHYDROGENASE INVOLVED IN NICOTINATE FERMENTATION

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
3cky			18680749	X-RAY DIFFRACTION/2.3

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A4]	[A4]	[A4]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
208891	A:167-300	All alpha proteins	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	automated matches	automated matches	Eubacterium barkeri [TaxId: 1528]
208890	A:4-166	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Eubacterium barkeri [TaxId: 1528]
208893	B:167-299	All alpha proteins	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	automated matches	automated matches	Eubacterium barkeri [TaxId: 1528]
208892	B:4-166	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Eubacterium barkeri [TaxId: 1528]
208895	C:167-300	All alpha proteins	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	automated matches	automated matches	Eubacterium barkeri [TaxId: 1528]
208894	C:5-166	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Eubacterium barkeri [TaxId: 1528]
208897	D:167-300	All alpha proteins	6-phosphogluconate dehydrogenase C-terminal domain-like	6-phosphogluconate dehydrogenase C-terminal domain-like	automated matches	automated matches	Eubacterium barkeri [TaxId: 1528]
208896	D:9-166	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Eubacterium barkeri [TaxId: 1528]

CATH

CATH ID	Node	Architecture	Topology	Homology
3ckyA01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
3ckyA02	1.10.1040.10	:Orthogonal Bundle	:N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	:N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2
3ckyB01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
3ckyB02	1.10.1040.10	:Orthogonal Bundle	:N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	:N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2
3ckyC01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
3ckyC02	1.10.1040.10	:Orthogonal Bundle	:N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	:N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2
3ckyD01	3.40.50.720	:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
3ckyD02	1.10.1040.10	:Orthogonal Bundle	:N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	:N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2