PDB ID : 3d4p [A4]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CA
DB
Title
CRYSTAL STRUCTURE OF LACTATE DEHYDROGENASE FROM STAPHYLOCOCCUS AUREUS COMPLEXED WITH NAD AND PYRUVATE

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
3d4p
Not in PubMed X-RAY DIFFRACTION/1.8 NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE
PYR:PYRUVIC ACID
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A4] [A4] [A4]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
208994 A:149-312Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeautomated matchesautomated matchesStaphylococcus aureus [TaxId: 93062]
208993 A:4-148Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesStaphylococcus aureus [TaxId: 93062]
208996 B:149-313Alpha and beta proteins (a+b)LDH C-terminal domain-likeLDH C-terminal domain-likeautomated matchesautomated matchesStaphylococcus aureus [TaxId: 93062]
208995 B:4-148Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesStaphylococcus aureus [TaxId: 93062]

CATH
CATH ID Node Class Architecture Topology Homology
3d4pA013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3d4pA023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
3d4pB013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3d4pB023.90.110.10:Alpha-Beta Complex:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal