PDB ID : 3jd1 [A6]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
From front %
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CC
DD
EE
FF
Title
GLUTAMATE DEHYDROGENASE IN COMPLEX WITH NADH, CLOSED CONFORMATION

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
3jd1
27036132 ELECTRON MICROSCOPY/3.3 NAI:1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A6] [A6] [A6]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
x5670_Not ClassifiedNot Classified 56Not Classified 56Not Classified 56Not Classified 56Not Classified 5670

CATH
CATH ID Node Class Architecture Topology Homology
3jd1A011.10.287.140:Orthogonal Bundle:Helix Hairpins:
3jd1A023.40.50.10860:3-Layer(aba) Sandwich:Rossmann fold:Leucine Dehydrogenase, chain A, domain 1
3jd1A033.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3jd1B011.10.287.140:Orthogonal Bundle:Helix Hairpins:
3jd1B023.40.50.10860:3-Layer(aba) Sandwich:Rossmann fold:Leucine Dehydrogenase, chain A, domain 1
3jd1B033.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3jd1C011.10.287.140:Orthogonal Bundle:Helix Hairpins:
3jd1C023.40.50.10860:3-Layer(aba) Sandwich:Rossmann fold:Leucine Dehydrogenase, chain A, domain 1
3jd1C033.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3jd1D011.10.287.140:Orthogonal Bundle:Helix Hairpins:
3jd1D023.40.50.10860:3-Layer(aba) Sandwich:Rossmann fold:Leucine Dehydrogenase, chain A, domain 1
3jd1D033.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3jd1E011.10.287.140:Orthogonal Bundle:Helix Hairpins:
3jd1E023.40.50.10860:3-Layer(aba) Sandwich:Rossmann fold:Leucine Dehydrogenase, chain A, domain 1
3jd1E033.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3jd1F011.10.287.140:Orthogonal Bundle:Helix Hairpins:
3jd1F023.40.50.10860:3-Layer(aba) Sandwich:Rossmann fold:Leucine Dehydrogenase, chain A, domain 1
3jd1F033.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain