PDB ID : 3ndi [A]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
From front %
From back %
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
Title
X-RAY STRUCTURE OF A C-3___sq___-METHYLTRANSFERASE IN COMPLEX WITH S- ADENOSYLMETHIONINE AND DTMP

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
3ndi
20527922 X-RAY DIFFRACTION/1.5 PO4:PHOSPHATE ION
SAM:S-ADENOSYLMETHIONINE
TMP:THYMIDINE-5___sq___-PHOSPHATE
ZN:ZINC ION
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A] [A] [A]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
306029 A:Alpha and beta proteins (a/b)S-adenosyl-L-methionine-dependent methyltransferasesS-adenosyl-L-methionine-dependent methyltransferasesC-3'-methyltransferase-likeTcaB9Micromonospora chalcea [TaxId: 1874]

CATH
CATH ID Node Class Architecture Topology Homology
3ndiA016.20.50.110:Other non-globular:N-terminal domain of TfIIb:Methyltransferase, zinc-binding domain
3ndiA023.40.50.150:3-Layer(aba) Sandwich:Rossmann fold:Vaccinia Virus protein VP39
3ndiA036.10.250.3100:Helix non-globular:Single alpha-helices involved in coiled-coils or other helix-helix interfaces:
3ndiA043.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain