PDB ID : 3ufx [A2B2]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CD
DE
Title
THERMUS AQUATICUS SUCCINYL-COA SYNTHETASE IN COMPLEX WITH GDP-MN2+

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
3ufx
22751660 X-RAY DIFFRACTION/2.35 GDP:GUANOSINE-5___sq___-DIPHOSPHATE
MN:MANGANESE (II) ION
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A2B2] [A2B2] [A2B2]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
217352 A:1-121Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesThermus aquaticus [TaxId: 271]
217353 A:122-288Alpha and beta proteins (a/b)Flavodoxin-likeSuccinyl-CoA synthetase domainsautomated matchesautomated matchesThermus aquaticus [TaxId: 271]
217354 D:1-121Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesThermus aquaticus [TaxId: 271]
217355 D:122-288Alpha and beta proteins (a/b)Flavodoxin-likeSuccinyl-CoA synthetase domainsautomated matchesautomated matchesThermus aquaticus [TaxId: 271]
217356 F:1-121Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesThermus aquaticus [TaxId: 271]
217357 F:122-288Alpha and beta proteins (a/b)Flavodoxin-likeSuccinyl-CoA synthetase domainsautomated matchesautomated matchesThermus aquaticus [TaxId: 271]
217358 H:1-121Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesThermus aquaticus [TaxId: 271]
217359 H:122-288Alpha and beta proteins (a/b)Flavodoxin-likeSuccinyl-CoA synthetase domainsautomated matchesautomated matchesThermus aquaticus [TaxId: 271]

CATH
CATH ID Node Class Architecture Topology Homology
3ufxA013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3ufxA023.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains
3ufxB013.30.470.20:2-Layer Sandwich:D-amino Acid Aminotransferase; Chain A, domain 1:ATP-grasp fold, B domain
3ufxB023.30.1490.20:2-Layer Sandwich:Dna Ligase; domain 1:ATP-grasp fold, A domain
3ufxB033.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains
3ufxD013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3ufxD023.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains
3ufxE013.30.470.20:2-Layer Sandwich:D-amino Acid Aminotransferase; Chain A, domain 1:ATP-grasp fold, B domain
3ufxE023.30.1490.20:2-Layer Sandwich:Dna Ligase; domain 1:ATP-grasp fold, A domain
3ufxE033.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains
3ufxF013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3ufxF023.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains
3ufxG013.30.470.20:2-Layer Sandwich:D-amino Acid Aminotransferase; Chain A, domain 1:ATP-grasp fold, B domain
3ufxG023.30.1490.20:2-Layer Sandwich:Dna Ligase; domain 1:ATP-grasp fold, A domain
3ufxG033.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains
3ufxH013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
3ufxH023.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains
3ufxI013.30.470.20:2-Layer Sandwich:D-amino Acid Aminotransferase; Chain A, domain 1:ATP-grasp fold, B domain
3ufxI023.30.1490.20:2-Layer Sandwich:Dna Ligase; domain 1:ATP-grasp fold, A domain
3ufxI033.40.50.261:3-Layer(aba) Sandwich:Rossmann fold:Succinyl-CoA synthetase domains