PDB ID : 4dmm [A2]

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ARa IRb





 a AR:All Residues
 b IR:Interface Residues

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Secondary Structure


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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
Title
3-OXOACYL-[ACYL-CARRIER-PROTEIN] REDUCTASE FROM SYNECHOCOCCUS ELONGATUS PCC 7942 IN COMPLEX WITH NADP

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
4dmm
Not in PubMed X-RAY DIFFRACTION/2.38 NAP:NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
SO4:SULFATE ION
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A2] [A2] [A2]

Interfaces
Interface ID Chain Inaterface
Class		 Interface Type Contact Type
4dmm_AB A
B		 HN
HN		 i12_CR(H21,N14)_HH(S3)_HN(L1,S6)
i12_CR(H21,N14)_HH(S3)_HN(L1,S6) 		c1_RP(HH16,NN23,HN20,NH18,EN1)_HH(P1,A1,S3)_HN(L4,S8)_EN(S1)
c1_RP(HH16,NN23,HN20,NH18,EN1)_HH(P1,A1,S3)_HN(L4,S8)_EN(S1)

Interface Class
Interface ID Interface 1 Interface 2
Domain Number of contact residues Binding site Class Percentages of Secondary structures(%) Domain Number of contact residues Binding site Class Percentages of Secondary structures(%)
H E N H E N
4dmm_AB A 39 HN 66.7 100 33.3 B 38 HN 63.2 0 36.8

Interface Type: Information for each interface
Interface ID chain Number of contact residues Number of elements Number of contacts between Secondary structure elements
HH EE HE HN EN
Hn En Nn H E N R L P A S P A S Ph Ah Ih P A S L S L S
4dmm_AB A 26 39 13 5 0 3 1 0 0 0 4 0 0 0 0 0 0 0 0 0 2 5 0 0
4dmm_AB B 24 0 14 5 0 3 1 0 0 0 4 0 0 0 0 0 0 0 0 0 1 6 0 0

Contact Type: Information of contacts between interfaces
Interface ID Number of residue pairs between SS elements Number of contacts between Secondary structure elements
H-H E-E N-N H-E H-N N-E E-H N-H E-N H-H E-E H-E H-N E-N
P A S Ih P A S IPh IAh P A S Ih L S Ih L S Ih
4dmm_AB 40 0 1 0 27 0 0 30 0 2 1 7 0 0 0 0 0 0 0 0 0 0 7 3 0 0 0 0

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
219861 A:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesSynechococcus elongatus [TaxId: 1140]
219862 B:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesSynechococcus elongatus [TaxId: 1140]
219863 C:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesSynechococcus elongatus [TaxId: 1140]
219864 D:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesSynechococcus elongatus [TaxId: 1140]

CATH
CATH ID Node Class Architecture Topology Homology
4dmmA003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
4dmmB003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
4dmmC003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
4dmmD003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain