OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 4jk3 [A]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

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Slab plane

Direction	Proportion
From front	%
From back	%
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Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A

Title

PYLD HOLOENZYME (SEMET)

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
4jk3			23720358	X-RAY DIFFRACTION/2.5	MG:MAGNESIUM ION MSE:SELENOMETHIONINE NA:SODIUM ION NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A]	[A]	[A]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
x29874	_	Not Classified	Not Classified 298	Not Classified 298	Not Classified 298	Not Classified 298	Not Classified 29874

CATH

CATH ID	Node	Class	Architecture	Topology	Homology
4jk3A01	3.40.50.12150		:3-Layer(aba) Sandwich	:Rossmann fold	:
4jk3A02	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
4jk3B01	3.40.50.12150		:3-Layer(aba) Sandwich	:Rossmann fold	:
4jk3B02	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain