OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 4p1y [A4B4]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

Download

Slab plane

Direction	Proportion
From front	%
From back	%
Move slab

Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A
B	B
C	C
D	D
E	E
F	F
G	G
H	H

Title

CRYSTAL STRUCTURE OF STAPHYLOCOCCAL GAMMA-HEMOLYSIN PREPORE

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
4p1y			25263813	X-RAY DIFFRACTION/2.99

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A4B4]	[A4B4]	[A8]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
259904	A:	Membrane and cell surface proteins and peptides	Leukocidin-like	Leukocidin-like	Leukocidin (pore-forming toxin)	automated matches	Staphylococcus aureus [TaxId: 158878]
259905	B:13-280	Membrane and cell surface proteins and peptides	Leukocidin-like	Leukocidin-like	automated matches	automated matches	Staphylococcus aureus [TaxId: 158878]
300143	B:6-12	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
260348	C:	Membrane and cell surface proteins and peptides	Leukocidin-like	Leukocidin-like	Leukocidin (pore-forming toxin)	automated matches	Staphylococcus aureus [TaxId: 158878]
260349	D:13-280	Membrane and cell surface proteins and peptides	Leukocidin-like	Leukocidin-like	automated matches	automated matches	Staphylococcus aureus [TaxId: 158878]
300144	D:6-12	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
263416	E:	Membrane and cell surface proteins and peptides	Leukocidin-like	Leukocidin-like	Leukocidin (pore-forming toxin)	automated matches	Staphylococcus aureus [TaxId: 158878]
263417	F:13-280	Membrane and cell surface proteins and peptides	Leukocidin-like	Leukocidin-like	automated matches	automated matches	Staphylococcus aureus [TaxId: 158878]
300145	F:6-12	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic
263418	G:	Membrane and cell surface proteins and peptides	Leukocidin-like	Leukocidin-like	Leukocidin (pore-forming toxin)	automated matches	Staphylococcus aureus [TaxId: 158878]
263419	H:13-280	Membrane and cell surface proteins and peptides	Leukocidin-like	Leukocidin-like	automated matches	automated matches	Staphylococcus aureus [TaxId: 158878]
300146	H:6-12	Artifacts	Tags	Tags	Tags	N-terminal Tags	Synthetic

CATH

CATH ID	Node	Architecture	Topology	Homology
4p1yA00	2.70.240.10	:Distorted Sandwich	:Leukocidin-like	:Leukocidin/porin MspA
4p1yB00	2.70.240.10	:Distorted Sandwich	:Leukocidin-like	:Leukocidin/porin MspA
4p1yC00	2.70.240.10	:Distorted Sandwich	:Leukocidin-like	:Leukocidin/porin MspA
4p1yD00	2.70.240.10	:Distorted Sandwich	:Leukocidin-like	:Leukocidin/porin MspA
4p1yE00	2.70.240.10	:Distorted Sandwich	:Leukocidin-like	:Leukocidin/porin MspA
4p1yF00	2.70.240.10	:Distorted Sandwich	:Leukocidin-like	:Leukocidin/porin MspA
4p1yG00	2.70.240.10	:Distorted Sandwich	:Leukocidin-like	:Leukocidin/porin MspA
4p1yH00	2.70.240.10	:Distorted Sandwich	:Leukocidin-like	:Leukocidin/porin MspA