PDB ID : 4q3b [A]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
From front %
From back %
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
Title
PYLD COCRYSTALLIZED WITH L-LYSINE-NE-D-LYSINE AND NAD+

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
4q3b
24916332 X-RAY DIFFRACTION/1.9 2YF:N~6~-[(2R)-2,3,4,5-TETRAHYDROPYRIDIN-2-YLCARBONYL]-L-LYSINE
EDO:1,2-ETHANEDIOL
GOL:GLYCEROL
MG:MAGNESIUM ION
NA:SODIUM ION
NAI:1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
PEG:DI(HYDROXYETHYL)ETHER
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A] [A] [A]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
x63322_Not ClassifiedNot Classified 633Not Classified 633Not Classified 633Not Classified 633Not Classified 63322

CATH
CATH ID Node Class Architecture Topology Homology
4q3bA013.40.50.12150:3-Layer(aba) Sandwich:Rossmann fold:
4q3bA023.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
4q3bB013.40.50.12150:3-Layer(aba) Sandwich:Rossmann fold:
4q3bB023.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
4q3bC013.40.50.12150:3-Layer(aba) Sandwich:Rossmann fold:
4q3bC023.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
4q3bD013.40.50.12150:3-Layer(aba) Sandwich:Rossmann fold:
4q3bD023.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain