OLIGAMI : Oligomer Architecture and Molecular Interface

PDB ID : 4xgi [A6]

Color

AR^a IR^b

Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)

^a AR:All Residues
^b IR:Interface Residues

Style

Secondary Structure

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Slab plane

Direction	Proportion
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From back	%
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Chain

Chain name		Ribbon	Spacefill	Cαonly
OLIGAMI	PDB
A	A
B	B
C	C
D	D
E	E
F	F

Title

CRYSTAL STRUCTURE OF GLUTAMATE DEHYDROGENASE FROM BURKHOLDERIA THAILANDENSIS

Structure Summary

PDB ID	Mutant	OPM	Pub Med	Method/Resolution	HETNAM
4xgi			Not in PubMed	X-RAY DIFFRACTION/2	AKG:2-OXOGLUTARIC ACID EDO:1,2-ETHANEDIOL NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE

Chain Formula
Amino Acid sequence	SCOPe Family Level	CATH Homology Level
[A6]	[A6]	[A6]

Structual Classification

SCOPe

SCOPe ID	Chain	Class	Fold	Superfamily	Family	Protein Domain	Species
269209	A:13-197	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269210	A:198-434	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269211	B:13-197	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269212	B:198-434	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269213	C:13-197	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269214	C:198-434	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269205	D:13-197	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269206	D:198-434	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269207	E:13-197	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269208	E:198-434	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269217	F:13-197	Alpha and beta proteins (a/b)	Aminoacid dehydrogenase-like, N-terminal domain	Aminoacid dehydrogenase-like, N-terminal domain	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]
269218	F:198-434	Alpha and beta proteins (a/b)	NAD(P)-binding Rossmann-fold domains	NAD(P)-binding Rossmann-fold domains	automated matches	automated matches	Burkholderia thailandensis [TaxId: 271848]

CATH

CATH ID	Node	Class	Architecture	Topology	Homology
4xgiA01	1.10.8.1210		:Orthogonal Bundle	:Helicase, Ruva Protein; domain 3	:
4xgiA02	3.40.50.10860		:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
4xgiA03	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
4xgiB01	1.10.8.1210		:Orthogonal Bundle	:Helicase, Ruva Protein; domain 3	:
4xgiB02	3.40.50.10860		:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
4xgiB03	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
4xgiC01	1.10.8.1210		:Orthogonal Bundle	:Helicase, Ruva Protein; domain 3	:
4xgiC02	3.40.50.10860		:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
4xgiC03	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
4xgiD01	1.10.8.1210		:Orthogonal Bundle	:Helicase, Ruva Protein; domain 3	:
4xgiD02	3.40.50.10860		:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
4xgiD03	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
4xgiE01	1.10.8.1210		:Orthogonal Bundle	:Helicase, Ruva Protein; domain 3	:
4xgiE02	3.40.50.10860		:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
4xgiE03	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain
4xgiF01	1.10.8.1210		:Orthogonal Bundle	:Helicase, Ruva Protein; domain 3	:
4xgiF02	3.40.50.10860		:3-Layer(aba) Sandwich	:Rossmann fold	:Leucine Dehydrogenase, chain A, domain 1
4xgiF03	3.40.50.720		:3-Layer(aba) Sandwich	:Rossmann fold	:NAD(P)-binding Rossmann-like Domain