PDB ID : 5bse [A10]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
From front %
From back %
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CC
DD
EE
FF
GG
HH
II
JJ
Title
CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA (DELTA)1-PYRROLINE-5- CARBOXYLATE REDUCTASE (MTP5CR)

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
5bse
26579138 X-RAY DIFFRACTION/1.7 CL:CHLORIDE ION
MPO:3[N-MORPHOLINO]PROPANE SULFONIC ACID
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A10] [A10] [A10]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
279150 A:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279149 A:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279148 B:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279147 B:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279144 C:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279142 C:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279152 D:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279151 D:5-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279146 E:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279145 E:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279154 F:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279153 F:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279160 G:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279159 G:7-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279156 H:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279155 H:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279158 I:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279157 I:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279162 J:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279161 J:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]

CATH
CATH ID Node Class Architecture Topology Homology
5bseA013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bseA021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bseB013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bseB021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bseC013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bseC021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bseD013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bseD021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bseE013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bseE021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bseF013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bseF021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bseG013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bseG021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bseH013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bseH021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bseI013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bseI021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bseJ013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bseJ021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like