PDB ID : 5bsf [A10]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
From front %
From back %
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CC
DD
EE
FF
GG
HH
II
JJ
Title
CRYSTAL STRUCTURE OF MEDICAGO TRUNCATULA (DELTA)1-PYRROLINE-5- CARBOXYLATE REDUCTASE (MTP5CR) IN COMPLEX WITH NAD+

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
5bsf
26579138 X-RAY DIFFRACTION/1.85 CL:CHLORIDE ION
MPO:3[N-MORPHOLINO]PROPANE SULFONIC ACID
NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A10] [A10] [A10]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
279184 A:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279183 A:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279192 B:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279191 B:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279188 C:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279186 C:5-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279187 D:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279185 D:4-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279190 E:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279189 E:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279196 F:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279195 F:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279194 G:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279193 G:7-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279198 H:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279197 H:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279200 I:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279199 I:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279202 J:170-274All alpha proteins6-phosphogluconate dehydrogenase C-terminal domain-like6-phosphogluconate dehydrogenase C-terminal domain-likeautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]
279201 J:3-169Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsautomated matchesautomated matchesMedicago truncatula [TaxId: 3880]

CATH
CATH ID Node Class Architecture Topology Homology
5bsfA013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bsfA021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bsfB013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bsfB021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bsfC013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bsfC021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bsfD013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bsfD021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bsfE013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bsfE021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bsfF013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bsfF021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bsfG013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bsfG021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bsfH013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bsfH021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bsfI013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bsfI021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like
5bsfJ013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5bsfJ021.10.3730.10:Orthogonal Bundle:ProC C-terminal domain-like fold:ProC C-terminal domain-like