Title
CRYSTAL STRUCTURE OF A SHORT-CHAIN DEHYDROGENASE/REDUCTASE SDR FROM BURKHOLDERIA VIETNAMIENSIS
Structure Summary
PDB ID |
Mutant |
OPM |
Pub Med |
Method/Resolution |
HETNAM |
5if3 |
|
|
Not in PubMed |
X-RAY DIFFRACTION/1.65 |
|
Chain Formula |
Amino Acid sequence |
SCOPe Family Level |
CATH Homology Level |
[A2] |
[A2] |
[A2] |
Interfaces
Interface ID |
Chain |
Inaterface Class |
Interface Type |
Contact Type |
5if3_AB |
A B |
HEN_iE
HEN_iE |
i2_CR(H12,E17,N21)_CE(H3,E5,N7)_HH(S1)_EE(Ah2,iE2,S1)_HE(S2)_HN(L1,S4)_EN(L1,S8)
i2_CR(H12,E17,N21)_CE(H3,E5,N7)_HH(S1)_EE(Ah2,iE2,S1)_HE(S2)_HN(L1,S4)_EN(L1,S8)
|
c2_RP(HH45,EE15,NN38,HE6,HN22,NE8,EH7,NH22,EN8)_HH(P3,A1,S3)_EE(S1)_HE(P1,S5)_HN(L4,S11)_EN(L1,S7)
c2_RP(HH45,EE15,NN38,HE6,HN22,NE8,EH7,NH22,EN8)_HH(P3,A1,S3)_EE(S1)_HE(P1,S5)_HN(L4,S11)_EN(L1,S7)
|
Interface Class
Interface ID |
Interface 1 |
Interface 2 |
Domain |
Number of contact residues |
Binding site Class |
Percentages of Secondary structures(%) |
Domain |
Number of contact residues |
Binding site Class |
Percentages of Secondary structures(%) |
H |
E |
N |
H |
E |
N |
5if3_AB |
A |
92 |
HEN_iE |
45.7 |
100 |
37 |
B |
91 |
HEN_iE |
48.4 |
18.7 |
33 |
Interface Type: Information for each interface
Interface ID |
chain |
Number of contact residues |
Number of elements |
Number of contacts between Secondary structure elements |
HH |
EE |
HE |
HN |
EN |
Hn |
En |
Nn |
H |
E |
N |
R |
L |
P |
A |
S |
P |
A |
S |
Ph |
Ah |
Ih |
P |
A |
S |
L |
S |
L |
S |
5if3_AB |
A |
42 |
92 |
34 |
6 |
4 |
9 |
0 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
2 |
0 |
2 |
1 |
0 |
4 |
3 |
10 |
0 |
5 |
5if3_AB |
B |
44 |
17 |
30 |
6 |
5 |
9 |
0 |
0 |
0 |
0 |
2 |
0 |
0 |
0 |
3 |
0 |
2 |
1 |
0 |
4 |
4 |
9 |
0 |
5 |
Contact Type: Information of contacts between interfaces
Interface ID |
Number of residue pairs between SS elements |
Number of contacts between Secondary structure elements |
H-H |
E-E |
N-N |
H-E |
H-N |
N-E |
E-H |
N-H |
E-N |
H-H |
E-E |
H-E |
H-N |
E-N |
P |
A |
S |
Ih |
P |
A |
S |
IPh |
IAh |
P |
A |
S |
Ih |
L |
S |
Ih |
L |
S |
Ih |
5if3_AB |
75 |
16 |
23 |
15 |
35 |
22 |
16 |
31 |
22 |
2 |
3 |
5 |
0 |
0 |
0 |
0 |
2 |
0 |
4 |
0 |
5 |
0 |
5 |
11 |
0 |
4 |
6 |
4 |
Structual Classification
SCOPe
CATH