PDB ID : 5in5 [A4]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
From front %
From back %
Move slab

Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CC
DD
Title
CRYSTAL STRUCTURE OF GDP-MANNOSE 4,6 DEHYDRATASE IN COMPLEX WITH NATURAL INHIBITOR GDP-FUCOSE

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
5in5
27434622 X-RAY DIFFRACTION/1.9 GDP:GUANOSINE-5___sq___-DIPHOSPHATE
GFB:GUANOSINE-5___sq___-DIPHOSPHATE-BETA-L-FUCOPYRANOSE
GOL:GLYCEROL
NAP:NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A4] [A4] [A4]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
321409 A:22-22ArtifactsTagsTagsTagsN-terminal TagsSynthetic
321408 A:23-372Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesGDP-mannose 4,6-dehydrataseHuman (Homo sapiens) [TaxId: 9606]
321345 B:22-22ArtifactsTagsTagsTagsN-terminal TagsSynthetic
321344 B:23-372Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesGDP-mannose 4,6-dehydrataseHuman (Homo sapiens) [TaxId: 9606]
321328 C:18-22ArtifactsTagsTagsTagsN-terminal TagsSynthetic
321327 C:23-372Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesGDP-mannose 4,6-dehydrataseHuman (Homo sapiens) [TaxId: 9606]
321437 D:22-22ArtifactsTagsTagsTagsN-terminal TagsSynthetic
321436 D:23-372Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesGDP-mannose 4,6-dehydrataseHuman (Homo sapiens) [TaxId: 9606]

CATH
CATH ID Node Class Architecture Topology Homology
5in5A013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5in5A023.90.25.10:Alpha-Beta Complex:UDP-galactose 4-epimerase; domain 1:UDP-galactose 4-epimerase, domain 1
5in5B013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5in5B023.90.25.10:Alpha-Beta Complex:UDP-galactose 4-epimerase; domain 1:UDP-galactose 4-epimerase, domain 1
5in5C013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5in5C023.90.25.10:Alpha-Beta Complex:UDP-galactose 4-epimerase; domain 1:UDP-galactose 4-epimerase, domain 1
5in5D013.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5in5D023.90.25.10:Alpha-Beta Complex:UDP-galactose 4-epimerase; domain 1:UDP-galactose 4-epimerase, domain 1