PDB ID : 5jdi [A3B]

Color

ARa IRb





 a AR:All Residues
 b IR:Interface Residues

Style





Secondary Structure


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Slab plane

Direction Proportion
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Chain
Chain name Ribbon Spacefill Cαonly
OLIGAMI PDB
AA
BB
CC
DD
Title
TRYPANOSOMA BRUCEI PTR1 IN COMPLEX WITH COFACTOR AND INHIBITOR NMT- H024 (COMPOUND 2)

Structure Summary
PDB ID Mutant OPM Pub Med Method/Resolution HETNAM
5jdi
27411733 X-RAY DIFFRACTION/1.38 6JO:3,6-DIHYDROXY-2-(3-HYDROXYPHENYL)-4H-1-BENZOPYRAN-4-ONE
ACT:ACETATE ION
CSX:S-OXY CYSTEINE
NAP:NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Chain Formula
Amino Acid sequence SCOPe Family Level CATH Homology Level
[A3B] [A4] [A4]

Structual Classification
SCOPe
SCOPe ID Chain Class Fold Superfamily Family Protein Domain Species
321381 A:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesDihydropteridin reductase (pteridine reductase)Trypanosoma brucei [TaxId: 5702]
321420 B:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesDihydropteridin reductase (pteridine reductase)Trypanosoma brucei [TaxId: 5702]
321449 C:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesDihydropteridin reductase (pteridine reductase)Trypanosoma brucei [TaxId: 5702]
321450 D:Alpha and beta proteins (a/b)NAD(P)-binding Rossmann-fold domainsNAD(P)-binding Rossmann-fold domainsTyrosine-dependent oxidoreductasesDihydropteridin reductase (pteridine reductase)Trypanosoma brucei [TaxId: 5702]

CATH
CATH ID Node Class Architecture Topology Homology
5jdiA003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5jdiB003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5jdiC003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain
5jdiD003.40.50.720:3-Layer(aba) Sandwich:Rossmann fold:NAD(P)-binding Rossmann-like Domain