PDB ID : 5jjn [A2B2]
Color
ARa IRb
|
|
a AR:All Residues
b IR:Interface Residues
b IR:Interface Residues
Slab plane
Title
STRUCTURE OF THE SRII/HTRII(G83F) COMPLEX IN P212121 SPACE GROUP ("V" SHAPE)
Structure Summary
| PDB ID | Mutant | OPM | Pub Med | Method/Resolution | HETNAM |
|---|---|---|---|---|---|
| 5jjn | 28165484 | X-RAY DIFFRACTION/2.25 | BOG:OCTYL BETA-D-GLUCOPYRANOSIDE LFA:EICOSANE RET:RETINAL |
| Chain Formula | ||
|---|---|---|
| Amino Acid sequence | SCOPe Family Level | CATH Homology Level |
| [A2B2] | [A2B2] | [A2B2] |
Structual Classification
SCOPe
| SCOPe ID | Chain | Class | Fold | Superfamily | Family | Protein Domain | Species |
|---|---|---|---|---|---|---|---|
| 329914 | A: | Membrane and cell surface proteins and peptides | Class A G protein-coupled receptor (GPCR)-like | Class A G protein-coupled receptor (GPCR)-like | Bacteriorhodopsin-like | Sensory rhodopsin II | Natronobacterium pharaonis [TaxId: 2257] |
| 329824 | C: | Membrane and cell surface proteins and peptides | Class A G protein-coupled receptor (GPCR)-like | Class A G protein-coupled receptor (GPCR)-like | Bacteriorhodopsin-like | Sensory rhodopsin II | Natronobacterium pharaonis [TaxId: 2257] |
CATH
| CATH ID | Node | Class | Architecture | Topology | Homology |
|---|---|---|---|---|---|
| 5jjnA00 | 1.20.1070.10 | :Up-down Bundle | :Rhopdopsin 7-helix transmembrane proteins | :Rhodopsin 7-helix transmembrane proteins | |
| 5jjnB00 | 1.10.287.470 | :Orthogonal Bundle | :Helix Hairpins | :Helix hairpin bin | |
| 5jjnC00 | 1.20.1070.10 | :Up-down Bundle | :Rhopdopsin 7-helix transmembrane proteins | :Rhodopsin 7-helix transmembrane proteins | |
| 5jjnD00 | 1.10.287.470 | :Orthogonal Bundle | :Helix Hairpins | :Helix hairpin bin |
