PDBID:
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Number of Chains
Domains
PDB ID : 5nqb [A4]
Color
AR
a
IR
b
Chain(OLIGAMI)
Chain(PDB)
Domain
CPK
Secondary Structure
Polar(blue)/
Nonpolar(white)
a
AR:All Residues
b
IR:Interface Residues
Style
Secondary Structure
Download
Slab plane
Direction
Proportion
From front
%
From back
%
Move slab
Chain
Chain name
Ribbon
Spacefill
C
α
only
OLIGAMI
PDB
A
A
B
B
C
C
D
D
Title
RABBIT MUSCLE L-LACTATE DEHYDROGENASE IN COMPLEX WITH MALONATE
Structure Summary
PDB ID
Mutant
OPM
Pub Med
Method/Resolution
HETNAM
5nqb
28691704
X-RAY DIFFRACTION/1.58
MLI
:MALONATE ION
Chain Formula
Amino Acid sequence
SCOPe Family Level
CATH Homology Level
[A4]
[A4]
[A4]
Structual Classification
SCOPe
SCOPe ID
Chain
Class
Fold
Superfamily
Family
Protein Domain
Species
333815
A:1-159
Alpha and beta proteins (a/b)
NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains
LDH N-terminal domain-like
Lactate dehydrogenase
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
333816
A:160-331
Alpha and beta proteins (a+b)
LDH C-terminal domain-like
LDH C-terminal domain-like
Lactate & malate dehydrogenases, C-terminal domain
Lactate dehydrogenase
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
333811
B:1-159
Alpha and beta proteins (a/b)
NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains
LDH N-terminal domain-like
Lactate dehydrogenase
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
333812
B:160-331
Alpha and beta proteins (a+b)
LDH C-terminal domain-like
LDH C-terminal domain-like
Lactate & malate dehydrogenases, C-terminal domain
Lactate dehydrogenase
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
333860
C:1-159
Alpha and beta proteins (a/b)
NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains
LDH N-terminal domain-like
Lactate dehydrogenase
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
333861
C:160-331
Alpha and beta proteins (a+b)
LDH C-terminal domain-like
LDH C-terminal domain-like
Lactate & malate dehydrogenases, C-terminal domain
Lactate dehydrogenase
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
333821
D:1-159
Alpha and beta proteins (a/b)
NAD(P)-binding Rossmann-fold domains
NAD(P)-binding Rossmann-fold domains
LDH N-terminal domain-like
Lactate dehydrogenase
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
333822
D:160-331
Alpha and beta proteins (a+b)
LDH C-terminal domain-like
LDH C-terminal domain-like
Lactate & malate dehydrogenases, C-terminal domain
Lactate dehydrogenase
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
CATH
CATH ID
Node
Class
Architecture
Topology
Homology
5nqbA01
3.40.50.720
:3-Layer(aba) Sandwich
:Rossmann fold
:NAD(P)-binding Rossmann-like Domain
5nqbA02
3.90.110.10
:Alpha-Beta Complex
:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2
:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
5nqbB01
3.40.50.720
:3-Layer(aba) Sandwich
:Rossmann fold
:NAD(P)-binding Rossmann-like Domain
5nqbB02
3.90.110.10
:Alpha-Beta Complex
:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2
:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
5nqbC01
3.40.50.720
:3-Layer(aba) Sandwich
:Rossmann fold
:NAD(P)-binding Rossmann-like Domain
5nqbC02
3.90.110.10
:Alpha-Beta Complex
:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2
:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
5nqbD01
3.40.50.720
:3-Layer(aba) Sandwich
:Rossmann fold
:NAD(P)-binding Rossmann-like Domain
5nqbD02
3.90.110.10
:Alpha-Beta Complex
:L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2
:Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal