PDB ID : 5ok4 [A6]
Color
ARa IRb
|
|
a AR:All Residues
b IR:Interface Residues
b IR:Interface Residues
Slab plane
Title
CRYSTAL STRUCTURE OF NATIVE [FE]-HYDROGENASE HMD FROM METHANOTHERMOBACTER MARBURGENSIS INACTIVATED BY O2.
Structure Summary
| PDB ID | Mutant | OPM | Pub Med | Method/Resolution | HETNAM |
|---|---|---|---|---|---|
| 5ok4 | 29462510 | X-RAY DIFFRACTION/1.29 | FE:FE (III) ION FEG:5___sq___-O-[(S)-{[2-(CARBOXYMETHYL)-6-HYDROXY-3,5-DIMETHYLPYRIDIN-4-YL]OXY}(HYDROXY)PHOSPHORYL]GUANOSINE GOL:GLYCEROL |
| Chain Formula | ||
|---|---|---|
| Amino Acid sequence | SCOPe Family Level | CATH Homology Level |
| [A6] | [A6] | [A6] |
Structual Classification
SCOPe
| SCOPe ID | Chain | Class | Fold | Superfamily | Family | Protein Domain | Species |
|---|---|---|---|---|---|---|---|
| 352184 | A:1-244 | Alpha and beta proteins (a/b) | NAD(P)-binding Rossmann-fold domains | NAD(P)-binding Rossmann-fold domains | automated matches | automated matches | Methanothermobacter marburgensis [TaxId: 79929] |
| 352185 | A:245-344 | All alpha proteins | 6-phosphogluconate dehydrogenase C-terminal domain-like | 6-phosphogluconate dehydrogenase C-terminal domain-like | automated matches | automated matches | Methanothermobacter marburgensis [TaxId: 79929] |
CATH
| CATH ID | Node | Class | Architecture | Topology | Homology |
|---|---|---|---|---|---|
| 5ok4A01 | 3.40.50.720 | :3-Layer(aba) Sandwich | :Rossmann fold | :NAD(P)-binding Rossmann-like Domain | |
| 5ok4A02 | 1.20.120.1300 | :Up-down Bundle | :Four Helix Bundle (Hemerythrin (Met), subunit A) | :Hmd, C-terminal helical subdomain |
